RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 SERPINB3P29508 390 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 CSTF2P33240 577 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SERPINB5P36952 375 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SCTRP47872 440 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 ARL4DP49703 201 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 NAA20P61599 178 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SNRPNP63162 240 aaKnown RBP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 GALNT1Q10472 559 aaPredicted RBP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 TARDBPQ13148 414 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 RBBP5Q15291 538 aaKnown RBP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 ZRSR2Q15696 482 aaKnown RBP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 GGTA1PQ4G0N0 100 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 CLEC6AQ6EIG7 209 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 TMIGD1Q6UXZ0 262 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 DGLUCYQ7Z3D6 616 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 VN1R5Q7Z5H4 357 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 VN1R4Q7Z5H5 301 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 ZNF781Q8N8C0 355 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 BMPERQ8N8U9 685 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 OR7G3Q8NG95 312 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 DEPDC7Q96QD5 511 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 HBEGFQ99075 208 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 MACROD1Q9BQ69 325 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SARGQ9BW04 601 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 CHRNA10Q9GZZ6 450 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 SLCO1B3Q9NPD5 702 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 FARSBQ9NSD9 589 aaKnown RBP10.2□□□□□ -0.78
TRIM6-209ENST00000507320 ZDHHC2Q9UIJ5 367 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 FIS1Q9Y3D6 152 aa10.2□□□□□ -0.78
TRIM6-209ENST00000507320 EFCAB7A8K855 629 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TMEM114B3SHH9 223 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 H0YGG7 62 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 H0YIV9 168 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 H3BMH7 237 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 KLF11O14901 512 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 P2RX6O15547 441 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 HSPA4LO95757 839 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 GRK3P35626 688 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 HNF4AP41235 474 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 HTR6P50406 440 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 NEK2P51955 445 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PKNOX1P55347 436 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 ARF3P61204 181 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 CYP4F2P78329 520 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 OCRLQ01968 901 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 RELAQ04206 551 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 NAA25Q14CX7 972 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 SH2D4BQ5SQS7 431 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TMPRSS12Q86WS5 348 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MCATQ8IVS2 390 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 LAS2Q8IYD9 372 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 AGBL5Q8NDL9 886 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 RAB3IL1Q8TBN0 382 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 WDR20Q8TBZ3 569 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 LRRC8CQ8TDW0 803 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PMEPA1Q969W9 287 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 GRAMD1AQ96CP6 724 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 ZNF501Q96CX3 271 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MTFMTQ96DP5 389 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 RNF31Q96EP0 1072 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MAGEB18Q96M61 343 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 APMAPQ9HDC9 416 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 FGF21Q9NSA1 209 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 STARD5Q9NSY2 213 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 THAP1Q9NVV9 213 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 CELSR3Q9NYQ7 3312 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 SCN3AQ9NY46 2000 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TMEM150CB9EJG8 249 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PCNAP12004 261 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 CXCR2P25025 360 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MDH1P40925 334 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 ETV5P41161 510 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 VSX2P58304 361 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 RPS15AP62244 130 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 FOXM1Q08050 763 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TUBB3Q13509 450 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 DDX39BQ13838 428 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PUM1Q14671 1186 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 HKDC1Q2TB90 917 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PAGE2BQ5JRK9 111 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 ATG16L1Q676U5 607 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MED27Q6P2C8 311 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 RAB11FIP2Q7L804 512 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TMPRSS7Q7RTY8 843 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 TRIM42Q8IWZ5 723 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 KRT78Q8N1N4 520 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MFSD9Q8NBP5 474 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 OR1L3Q8NH93 324 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 HUS1BQ8NHY5 278 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 METTL6Q8TCB7 284 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 LIN37Q96GY3 246 aaPredicted RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 MTERF1Q99551 399 aaKnown RBP10.19□□□□□ -0.78
TRIM6-209ENST00000507320 CMKLR1Q99788 373 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
TRIM6-209ENST00000507320 AICDAQ9GZX7 198 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms