RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 BCORP1Q8N888 145 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 SUN3Q8TAQ9 357 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 EEF1AKMT1Q8WVE0 214 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 FAR1Q8WVX9 515 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 SARGQ9BW04 601 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 SGPP1Q9BX95 441 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 ZNF700Q9H0M5 742 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 CLK4Q9HAZ1 481 aaKnown RBP13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
HMGCS1-203ENST00000507004 WIPF3A6NGB9 483 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 SEMA7AO75326 666 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 AHSGP02765 367 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 BCL6P41182 706 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 PAFAH1B1P43034 410 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 CCR8P51685 355 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 ARL4CP56559 192 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 CSNK1G2P78368 415 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 Q0VFX4 171 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 NAE1Q13564 534 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 HERC3Q15034 1050 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 TMEM214Q6NUQ4 689 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 PAQR3Q6TCH7 311 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 LINC00696Q6ZRV3 163 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 STRA8Q7Z7C7 330 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 LAPTM4BQ86VI4 370 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 ZC3H7AQ8IWR0 971 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 ABHD11Q8NFV4 315 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 C8orf44Q96CB5 159 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 TM4SF19Q96DZ7 209 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 LINGO1Q96FE5 620 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 PDLIM5Q96HC4 596 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 OR1F2PQ96R84 312 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 NDNQ99608 321 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 GRPEL1Q9HAV7 217 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 PPANQ9NQ55 473 aaKnown RBP13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 ARL15Q9NXU5 204 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 NSMCE4AQ9NXX6 385 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 VWA7Q9Y334 891 aa13.67□□□□□ -0.22
HMGCS1-203ENST00000507004 URADA6NGE7 173 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 MASP2O00187 686 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 DR1Q01658 176 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 MEF2AQ02078 507 aaPredicted RBP13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 PWP1Q13610 501 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 TEDDM1Q5T9Z0 273 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 ABHD17BQ5VST6 288 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 VN1R4Q7Z5H5 301 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 TMEM151BQ8IW70 566 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 DTWD1Q8N5C7 304 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 MFSD9Q8NBP5 474 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 BBOF1Q8ND07 529 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 BRIX1Q8TDN6 353 aaKnown RBP13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 PSMF1Q92530 271 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 FBXL8Q96CD0 374 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 PTGFRNQ9P2B2 879 aa13.66□□□□□ -0.22
HMGCS1-203ENST00000507004 CYSRT1A8MQ03 144 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 P2RX6O15547 441 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 KLHL18O94889 574 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 LDLRP01130 860 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 CRYABP02511 175 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 NPPBP16860 134 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 IVDP26440 423 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 GABRB3P28472 473 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 TNFSF10P50591 281 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 EEF1A2Q05639 463 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 RGS1Q08116 209 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 PCOLCEQ15113 449 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 EXT1Q16394 746 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 MINDY4Q4G0A6 757 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 HECTD2Q5U5R9 776 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 STEAP4Q687X5 459 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 PLAG1Q6DJT9 500 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 CPEB2Q7Z5Q1 589 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 SLC26A11Q86WA9 606 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 NKAPQ8N5F7 415 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OR1N1Q8NGS0 311 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OR9A4Q8NGU2 314 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OR56A3Q8NH54 315 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OR51Q1Q8NH59 317 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 DNAJB8Q8NHS0 232 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 VPS39Q96JC1 886 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 IMMP1LQ96LU5 166 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 OLAHQ9NV23 265 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 ADAMTS6Q9UKP5 1117 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 SAR1BQ9Y6B6 198 aa13.65□□□□□ -0.22
HMGCS1-203ENST00000507004 RELNP78509 3460 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms