RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ARPINQ7Z6K5 226 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 SLC44A3Q8N4M1 653 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 ANKRD53Q8N9V6 530 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 OR4K1Q8NGD4 311 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PDXPQ96GD0 296 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 NSMCE2Q96MF7 247 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PRAP1Q96NZ9 151 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 KCNH6Q9H252 994 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PHPT1Q9NRX4 125 aaPredicted RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 OAZ3Q9UMX2 235 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PPM1DO15297 605 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 PCDH7O60245 1069 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 SLC35G4P0C7Q5 338 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 AK4P27144 223 aaPredicted RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 MTAPQ13126 283 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 AGERQ15109 404 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RBBP5Q15291 538 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 Q6ZS52 159 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 FAM129CQ86XR2 697 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 CBR4Q8N4T8 237 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 TRPV3Q8NET8 790 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 FAM131CQ96AQ9 280 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 FERD3LQ96RJ6 166 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 APOOQ9BUR5 198 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 ANAPC2Q9UJX6 822 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 RUVBL1Q9Y265 456 aaKnown RBP11.73□□□□□ -0.53
LIN54-206ENST00000506560 MAN2B2Q9Y2E5 1009 aa11.73□□□□□ -0.53
LIN54-206ENST00000506560 DLGAP1O14490 977 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 PRPS1L1P21108 318 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 KELP23276 732 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 MAPK1P28482 360 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.53
LIN54-206ENST00000506560 IST1P53990 364 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 LAPTM5Q13571 262 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 SDE2Q6IQ49 451 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 TBPL2Q6SJ96 375 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 ZNF621Q6ZSS3 439 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 LAS2Q8IYD9 372 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 WDR34Q96EX3 536 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 PANX1Q96RD7 426 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 MACROD1Q9BQ69 325 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 CHID1Q9BWS9 393 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 BTBD1Q9H0C5 482 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 BRF2Q9HAW0 419 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 TRBV23OR9-2A0A075B6M9 112 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 A0A096LPI6 279 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 A0A0G2JN53 185 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 FPGTO14772 594 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 SCAMP2O15127 329 aaKnown RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 TDRD6O60522 2096 aaKnown RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 KLK1P06870 262 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 ABCB1P08183 1280 aaPredicted RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 NUDT7P0C024 238 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 IL10P22301 178 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 IDSP22304 550 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 MAPK9P45984 424 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 CCT8P50990 548 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 PLOD1Q02809 727 aaPredicted RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 RPA4Q13156 261 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 GAB1Q13480 694 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 MDC1Q14676 2089 aaKnown RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 UGT2A3Q6UWM9 527 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 NETO1Q8TDF5 533 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 CIDECQ96AQ7 238 aaPredicted RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 ITCHQ96J02 903 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 GBP5Q96PP8 586 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 SOX17Q9H6I2 414 aaPredicted RBP11.72□□□□□ -0.53
LIN54-206ENST00000506560 SYNPO2LQ9H987 977 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 SH3BP4Q9P0V3 963 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 SLC17A4Q9Y2C5 497 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 KLHL20Q9Y2M5 609 aa11.72□□□□□ -0.53
LIN54-206ENST00000506560 IGKV1-8A0A0C4DH67 115 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ELOVL7A1L3X0 281 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 PDZK1P1A8MUH7 402 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ACOX3O15254 700 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 PI15O43692 258 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 BMP2P12643 396 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 MPEG1Q2M385 716 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ANKRD34AQ69YU3 496 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 OR52E8Q6IFG1 317 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ZNF852Q6ZMS4 543 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 TMEM126BQ8IUX1 230 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 TSACCQ96A04 125 aaPredicted RBP11.71□□□□□ -0.53
LIN54-206ENST00000506560 BTBD9Q96Q07 612 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 EFHD1Q9BUP0 239 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 EFCAB11Q9BUY7 163 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ABCG4Q9H172 646 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 ADGRE2Q9UHX3 823 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 VPS4AQ9UN37 437 aa11.71□□□□□ -0.53
LIN54-206ENST00000506560 CXCR6O00574 342 aa11.71□□□□□ -0.54
LIN54-206ENST00000506560 LCMT2O60294 686 aaKnown RBP11.71□□□□□ -0.54
LIN54-206ENST00000506560 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.54
LIN54-206ENST00000506560 CLIC3O95833 236 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms