RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 DPEP1P16444 411 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 VCLP18206 1134 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 THOP1P52888 689 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 CLDN15P56746 228 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 BPIFB3P59826 476 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 FOLH1Q04609 750 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 SULT2A1Q06520 285 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 SF3B4Q15427 424 aaKnown RBP eCLIP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 SGCBQ16585 318 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ODF4Q2M2E3 257 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 TTC31Q49AM3 519 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 AARDQ4LEZ3 155 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 PARP10Q53GL7 1025 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF425Q6IV72 752 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 PIWIL4Q7Z3Z4 852 aaKnown RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 RABEPKQ7Z6M1 372 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ANKRD46Q86W74 232 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 CCDC83Q8IWF9 413 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 CNTN4Q8IWV2 1026 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF619Q8N2I2 560 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 IQCF1Q8N6M8 205 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 RTL3Q8N8U3 475 aaKnown RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 OR4K1Q8NGD4 311 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ST7LQ8TDW4 575 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ELP5Q8TE02 316 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 P2RX5Q93086 422 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 BICD1Q96G01 975 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 NAF1Q96HR8 494 aaKnown RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ADGRG7Q96K78 797 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 FAM71F1Q96KD3 344 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 GAL3ST4Q96RP7 486 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 CSTL1Q9H114 145 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 TNMDQ9H2S6 317 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 APOBEC3GQ9HC16 384 aaKnown RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF701Q9NV72 531 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 SLC38A7Q9NVC3 462 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 PKD2L2Q9NZM6 624 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 MALT1Q9UDY8 824 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 GMEB2Q9UKD1 530 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 TMED3Q9Y3Q3 217 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 QSER1Q2KHR3 1735 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 PKD1L3Q7Z443 1732 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 KIAA1217Q5T5P2 1943 aa3.01□□□□□ -1.93
TRAPPC11-205ENST00000506426 CARMIL3Q8ND23 1372 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 HEG1Q9ULI3 1381 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 KCPQ6ZWJ8 1503 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 COL24A1Q17RW2 1714 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 SYCE3A1L190 88 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CTAGE9A4FU28 777 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ASPDHA6ND91 283 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 MYMKA6NI61 221 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 TMEM150CB9EJG8 249 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 SYNGR3O43761 229 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 SLC28A2O43868 658 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ATP9AO75110 1047 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 NME6O75414 186 aaPredicted RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 DDHD2O94830 711 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 OAZ2O95190 189 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ACAA1P09110 424 aaPredicted RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CTAGE8P0CG41 777 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 STAG3L1P0CL83 205 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 SERPINB6P35237 376 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 IER3P46695 156 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 RPL24P83731 157 aaKnown RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CACNG1Q06432 222 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 KLC1Q07866 573 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF415Q09FC8 603 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 GAGE5Q13069 117 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 GAGE6Q13070 117 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 NONOQ15233 471 aaKnown RBP eCLIP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 RBBP7Q16576 425 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 PHKG1Q16816 387 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF260Q3ZCT1 412 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 PHLDA2Q53GA4 152 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 LRRC38Q5VT99 294 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ETFRF1Q6IPR1 90 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF530Q6P9A1 599 aaPredicted RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 PODNL1Q6PEZ8 512 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CORO6Q6QEF8 472 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 BTNL8Q6UX41 500 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF554Q86TJ5 538 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 MEX3DQ86XN8 651 aaKnown RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 TMEM139Q8IV31 216 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CTAGE4Q8IX94 777 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 APCDD1Q8J025 514 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 LGI2Q8N0V4 545 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 PELI3Q8N2H9 469 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 AMER3Q8N944 861 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 NOA1Q8NC60 698 aaKnown RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CKAP2Q8WWK9 683 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 BCL2L2Q92843 193 aaPredicted RBP3□□□□□ -1.93
TRAPPC11-205ENST00000506426 RTP4Q96DX8 246 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 EEF2KMTQ96G04 330 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 C5orf30Q96GV9 206 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 CDKN2AIPNLQ96HQ2 116 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 RTP3Q9BQQ7 232 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 ATG101Q9BSB4 218 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 SPXQ9BT56 116 aa3□□□□□ -1.93
TRAPPC11-205ENST00000506426 POLR3CQ9BUI4 534 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms