RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 USP7Q93009 1102 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 SEMA3CQ99985 751 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
SCLT1-208ENST00000506368 TTPALQ9BTX7 342 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 NTMT1Q9BV86 223 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 KLK14Q9P0G3 267 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 ASB1Q9Y576 335 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 SNX8Q9Y5X2 465 aa15.39■□□□□ 0.05
SCLT1-208ENST00000506368 C2orf81A6NN90 581 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 E5RI56 91 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 RFXANKO14593 260 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 GSTM1P09488 218 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 MYCLP1P12525 358 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 PRPH2P23942 346 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 CHMP24386 653 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 PSMA1P25786 263 aaKnown RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 ADCYAP1R1P41586 468 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 YBEYP58557 167 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 PDZK1Q5T2W1 519 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 GPR153Q6NV75 609 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 HSDL2Q6YN16 418 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 CCDC149Q6ZUS6 474 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 DDX53Q86TM3 631 aaKnown RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 SLC44A2Q8IWA5 706 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 GPR151Q8TDV0 419 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 C8orf48Q96LL4 319 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 HYLS1Q96M11 299 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 KLHL5Q96PQ7 755 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 RNF167Q9H6Y7 350 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 ABCB8Q9NUT2 735 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 TMEM30AQ9NV96 361 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 GPR83Q9NYM4 423 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 MPP6Q9NZW5 540 aa15.38■□□□□ 0.05
SCLT1-208ENST00000506368 ARIH1Q9Y4X5 557 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-208ENST00000506368 LINC00862A6NCI5 91 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 NPIPB8E9PQR5 432 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 ZNF670-ZNF695F2Z2N8 137 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 ZNF865P0CJ78 1059 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 ITGB7P26010 798 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 CD83Q01151 205 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 IHHQ14623 411 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TSTQ16762 297 aaKnown RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TAPT1Q6NXT6 567 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MZT2BQ6NZ67 158 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PLET1Q6UQ28 207 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 LYPD8Q6UX82 237 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 CLDN22Q8N7P3 220 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 YIPF7Q8N8F6 280 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 LPCAT1Q8NF37 534 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TOR1AIP2Q8NFQ8 470 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PXYLP1Q8TE99 480 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 UBTD2Q8WUN7 234 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MYLPFQ96A32 169 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 ESAMQ96AP7 390 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 REPS1Q96D71 796 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 HHIPQ96QV1 700 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 IMPAD1Q9NX62 359 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SIRT5Q9NXA8 310 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 EIF3KQ9UBQ5 218 aaKnown RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 CORO2BQ9UQ03 480 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PCDHB1Q9Y5F3 818 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 AUP1Q9Y679 476 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PATJQ8NI35 1801 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SMIM35A0A1B0GVV1 85 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TFECO14948 347 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 FFAR2O15552 330 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 VIPP01282 170 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 HSMCR30P0CW71 290 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 ODC1P11926 461 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 BCKDHAP12694 445 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PTBP1P26599 531 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 HLA-FP30511 346 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PTGER3P43115 390 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 KCNQ1P51787 676 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PRMT2P55345 433 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 CDC42P60953 191 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MED22Q15528 200 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TAB1Q15750 504 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 HKDC1Q2TB90 917 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SOWAHCQ53LP3 525 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 COL13A1Q5TAT6 717 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 RNLSQ5VYX0 342 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PGBD5Q8N414 524 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 KRTCAP2Q8N6L1 136 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 DCBLD1Q8N8Z6 715 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SIDT2Q8NBJ9 832 aaKnown RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 OR9Q1Q8NGQ5 310 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PSMG2Q969U7 264 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MSLNLQ96KJ4 702 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MCOLN1Q9GZU1 580 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 MMP28Q9H239 520 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 TEKT2Q9UIF3 430 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PIN4Q9Y237 131 aaKnown RBP15.37■□□□□ 0.05
SCLT1-208ENST00000506368 IPPQ9Y573 584 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 PCDHGA2Q9Y5H1 932 aa15.37■□□□□ 0.05
SCLT1-208ENST00000506368 SNTNA6NMZ2 147 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms