RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 OTOP1Q7RTM1 612 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 KCNK18Q7Z418 384 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SZRD1Q7Z422 152 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MON1AQ86VX9 555 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CILP2Q8IUL8 1156 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 BBS7Q8IWZ6 715 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR56B2PQ8NGI1 322 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR2V1Q8NHB1 315 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DYNC2LI1Q8TCX1 351 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SDR42E1Q8WUS8 393 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ART4Q93070 314 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF775Q96BV0 537 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ERGIC2Q96RQ1 377 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CHP1Q99653 195 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TMEM175Q9BSA9 504 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GTPBP2Q9BX10 602 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLIRPQ9GZT3 109 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MS4A7Q9GZW8 240 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR51V1Q9H2C8 321 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 XPNPEP1Q9NQW7 623 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SEMA3GQ9NS98 782 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 NXF1Q9UBU9 619 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 KLHL21Q9UJP4 597 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SHOC2Q9UQ13 582 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PUS1Q9Y606 427 aaKnown RBP eCLIP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 NPTNQ9Y639 398 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MRPS18BQ9Y676 258 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 A0A1W2PPW3 197 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CCDC160A6NGH7 325 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MKRN2OSH3BPM6 223 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TRIM3O75382 744 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR7A10O76100 309 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PGLSO95336 258 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 C1RP00736 705 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CSTBP04080 98 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DBTP11182 482 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CYP2A6P11509 494 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CETPP11597 493 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ARF4P18085 180 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 AOC1P19801 751 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ATP5A1P25705 553 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RPA1P27694 616 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 IL1R2P27930 398 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PSMB6P28072 239 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 LSSP48449 732 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FNTBP49356 437 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 AFF3P51826 1226 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC12A3P55017 1021 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OCA2Q04671 838 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MZT1Q08AG7 82 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DMC1Q14565 340 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GPR19Q15760 415 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZBTB6Q15916 424 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MFSD14BQ5SR56 506 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MBNL2Q5VZF2 373 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PAPD4Q6PIY7 484 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MSANTD1Q6ZTZ1 278 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 LRRTM4Q86VH4 590 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 YAF2Q8IY57 180 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FAM71AQ8IYT1 594 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FAM9CQ8IZT9 166 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PQLC1Q8N2U9 271 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ARRDC1Q8N5I2 433 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ANKRD13CQ8N6S4 541 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 NETO2Q8NC67 525 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR5M1Q8NGP8 315 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DTX3LQ8TDB6 740 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZHX1-C8orf76Q96EF9 292 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 C14orf79Q96F83 325 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ELMOD3Q96FG2 381 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 P2RY11Q96G91 374 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 C12orf57Q99622 126 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 YTHDF1Q9BYJ9 559 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GPR63Q9BZJ6 419 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MIXL1Q9H2W2 232 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RIMS4Q9H426 269 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GAREM1Q9H706 876 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MCM9Q9NXL9 1143 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC24A2Q9UI40 661 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CDH22Q9UJ99 828 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SERTAD3Q9UJW9 196 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 AGTPBP1Q9UPW5 1226 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC22A23A1A5C7 686 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 H3BNC9 293 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 RPL36A-HNRNPH2H7BZ11 118 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 H7C417 338 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 TNPO2O14787 897 aaKnown RBP2.19□□□□□ -2.06
NEDD4-205ENST00000506154 SIGLEC6O43699 453 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 SSX5O60225 188 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 DNAJB6O75190 326 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 IFNA2P01563 188 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 SRCP12931 536 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 SPNP16150 400 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 DDX6P26196 483 aaKnown RBP eCLIP2.19□□□□□ -2.06
NEDD4-205ENST00000506154 MGAT1P26572 445 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 CTNNA1P35221 906 aaKnown RBP2.19□□□□□ -2.06
NEDD4-205ENST00000506154 NAMPTP43490 491 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 RPS5P46782 204 aaKnown RBP2.19□□□□□ -2.06
NEDD4-205ENST00000506154 RABIFP47224 123 aa2.19□□□□□ -2.06
NEDD4-205ENST00000506154 COPB1P53618 953 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms