RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 OR6P1Q8NGX9 317 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 SPATA22Q8NHS9 363 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 GGHQ92820 318 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 ACTL8Q9H568 366 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 AAR2Q9Y312 384 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 MBLAC1A4D2B0 266 aaPredicted RBP12.87□□□□□ -0.35
LETM1-203ENST00000505551 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PLA2G10O15496 165 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 STAU1O95793 577 aaKnown RBP12.87□□□□□ -0.35
LETM1-203ENST00000505551 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.354e-8■■□□□ 13.9
LETM1-203ENST00000505551 BRCC3P46736 316 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 CRISP3P54108 245 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 DAB2P98082 770 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 SSPNQ14714 243 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 OR4D1Q15615 310 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PAN2Q504Q3 1202 aaKnown RBP12.87□□□□□ -0.35
LETM1-203ENST00000505551 RGMBQ6NW40 437 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 TMEM81Q6P7N7 255 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PIM3Q86V86 326 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ZDHHC21Q8IVQ6 265 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 OR52K2Q8NGK3 314 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PYURFQ96I23 114 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 AOC2O75106 756 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 TNFRSF21O75509 655 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 SERPINA1P01009 418 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ITGB1P05556 798 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 DGKQP52824 942 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 FBXO47Q5MNV8 452 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ZER1Q7Z7L7 766 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 KRT73Q86Y46 540 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 OR8H3Q8N146 312 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 GDPD1Q8N9F7 314 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ENKURQ8TC29 256 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 KLHL6Q8WZ60 621 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ATOH8Q96SQ7 321 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 MYOCQ99972 504 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 FICDQ9BVA6 458 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 KRT84Q9NSB2 600 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 TRPS1Q9UHF7 1281 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
LETM1-203ENST00000505551 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 SLC7A4O43246 635 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 TSC22D2O75157 780 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 RFPL3O75679 317 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 FPR1P21462 350 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 KCNQ1P51787 676 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 ZNF33BQ06732 778 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 NPRL3Q12980 569 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 CCINQ13939 588 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 ZBTB6Q15916 424 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 OR2T5Q6IEZ7 315 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 KDELC1Q6UW63 502 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 CTU1Q7Z7A3 348 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 ADGRG3Q86Y34 549 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 PHC2Q8IXK0 858 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 OR2T29Q8NH02 315 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 NT5C3BQ969T7 300 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 CRELD1Q96HD1 420 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 THUMPD3Q9BV44 507 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 GPRC5BQ9NZH0 403 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 SPASTQ9UBP0 616 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 TNPO3Q9Y5L0 923 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 UBA6A0AVT1 1052 aaPredicted RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 OR6C65A6NJZ3 312 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 STX16O14662 325 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 UROSP10746 265 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 HPGDP15428 266 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 DNAJA1P31689 397 aaKnown RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 ADRA1AP35348 466 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
LETM1-203ENST00000505551 RAC1P63000 192 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 TP53BP2Q13625 1128 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 KIAA0040Q15053 153 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
LETM1-203ENST00000505551 ARHGAP17Q68EM7 881 aa12.86□□□□□ -0.35
LETM1-203ENST00000505551 PLET1Q6UQ28 207 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms