RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 MNDAP41218 407 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 APOBEC1P41238 236 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PTGFRP43088 359 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PPP3CCP48454 512 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 RGS4P49798 205 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 THOP1P52888 689 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SUCLG1P53597 346 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CTSCP53634 463 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 RPS8P62241 208 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 HERV-K104P63124 156 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CAP1Q01518 475 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ROR2Q01974 943 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CNTN2Q02246 1040 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CACNG1Q06432 222 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TGM3Q08188 693 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 FGL1Q08830 312 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 NCBP1Q09161 790 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 HSPA14Q0VDF9 509 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 NME3Q13232 169 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SRSF5Q13243 272 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PKP1Q13835 747 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 IDI1Q13907 227 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ARHGAP19Q14CB8 494 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CTF1Q16619 201 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 STX1AQ16623 288 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SMTNL2Q2TAL5 461 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 POM121L1PQ3SYA9 428 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GPAT3Q53EU6 434 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZC2HC1CQ53FD0 456 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 FBXO48Q5FWF7 155 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ELFN2Q5R3F8 820 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 FRG2Q64ET8 278 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 C18orf63Q68DL7 685 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ASPHD2Q6ICH7 369 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GAGE2AQ6NT46 116 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 RGMBQ6NW40 437 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMEM71Q6P5X7 295 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SYT10Q6XYQ8 523 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF813Q6ZN06 617 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF704Q6ZNC4 412 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 Q6ZNX1 250 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM131BQ86XD5 332 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 RBFAQ8N0V3 343 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 LGI2Q8N0V4 545 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PNLDC1Q8NA58 520 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TP53I13Q8NBR0 393 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 MINDY2Q8NBR6 621 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC38A9Q8NBW4 561 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR4K1Q8NGD4 311 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GOLGA5Q8TBA6 731 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRMT10AQ8TBZ6 339 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PROKR1Q8TCW9 393 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 DQX1Q8TE96 717 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 CCDC107Q8WV48 283 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 DAZLQ92904 295 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 P2RX5Q93086 422 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 P2RY11Q96G91 374 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF48Q96MX3 618 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GUCD1Q96NT3 240 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 NPAS2Q99743 824 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 HAUS8Q9BT25 410 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 KCNN2Q9H2S1 579 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 HAUS4Q9H6D7 363 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 EXO5Q9H790 373 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 UPF2Q9HAU5 1272 aaKnown RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 MLXIPLQ9NP71 852 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 MMP25Q9NPA2 562 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC2A4RGQ9NR83 387 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PHPT1Q9NRX4 125 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 RNF146Q9NTX7 359 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 EXOC1Q9NV70 894 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 BCAP29Q9UHQ4 241 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TEKT2Q9UIF3 430 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PSORS1C1Q9UIG5 152 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMED7Q9Y3B3 224 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR10H1Q9Y4A9 318 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 NME7Q9Y5B8 376 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 PFASO15067 1338 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 MAST3O60307 1309 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 MROH5Q6ZUA9 1318 aa3.44□□□□□ -1.86
HMGB1P22-201ENST00000505315 HEG1Q9ULI3 1381 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRAV18A0A075B6X5 111 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 A0A1W2PPK0 400 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM181BA6NEQ2 426 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM90A26D6RGX4 464 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 POC1B-GALNT4F8VUJ3 575 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 SPECC1L-ADORA2AF8WAN1 911 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MS4A18H0YCH9 400 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 KIF2AO00139 706 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DNALI1O14645 258 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF197O14709 1029 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ITM2AO43736 263 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 EXTL3O43909 919 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR10H2O60403 315 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 SNNO75324 88 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TM7SF2O76062 418 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 PIGNO95427 931 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms