RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 NCKAP1Q9Y2A7 1128 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 WASHC1A8K0Z3 465 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 WASH3PC4AMC7 463 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 KBTBD13C9JR72 458 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 H7C1Q1 480 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PTGESO14684 152 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FCMRO60667 390 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 RPS6KA4O75676 772 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CD40LGP29965 261 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 NAMPTP43490 491 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 FGL1Q08830 312 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 C2orf68Q2NKX9 166 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 PLEKHO1Q53GL0 409 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ALS2CLQ60I27 953 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 WASH2PQ6VEQ5 465 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 COPS6Q7L5N1 327 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CXXC5Q7LFL8 322 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 TMPRSS9Q7Z410 1059 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 MDGA2Q7Z553 956 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ZC3HC1Q86WB0 502 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 TRPV3Q8NET8 790 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 DAZLQ92904 295 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ZC3HAV1LQ96H79 300 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CCDC120Q96HB5 630 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 APOLD1Q96LR9 279 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 CHRDL1Q9BU40 450 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 MRPL13Q9BYD1 178 aaKnown RBP4.99□□□□□ -1.61
NIPBL-204ENST00000504430 BPIFA1Q9NP55 256 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 ABHD10Q9NUJ1 306 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 LCMT1Q9UIC8 334 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 KLK4Q9Y5K2 254 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 SPATA31A1Q5TZJ5 1347 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 SPATA31A5Q5VU36 1347 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 SPATA31A7Q8IWB4 1347 aa4.99□□□□□ -1.61
NIPBL-204ENST00000504430 A0A087WUV0 522 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 OR6C68A6NDL8 312 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 FBLL1A6NHQ2 334 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 B5MCH6 92 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF701M0R085 212 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ERN1O75460 977 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF37AP17032 561 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GJA1P17302 382 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 G0S2P27469 103 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 NDST2P52849 883 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 DAOAP59103 153 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 TRIP10Q15642 601 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 LACTB2Q53H82 288 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF658Q5TYW1 1059 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PLCXD3Q63HM9 321 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SLC39A5Q6ZMH5 540 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 DET1Q7L5Y6 550 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GDF7Q7Z4P5 450 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 TBC1D26Q86UD7 250 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 RNF130Q86XS8 419 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 TBC1D10CQ8IV04 446 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GALNT16Q8N428 558 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CERS5Q8N5B7 392 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 MLKLQ8NB16 471 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 C9orf43Q8TAL5 461 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SOCS4Q8WXH5 440 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PHYHIPQ92561 330 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SLCO2A1Q92959 643 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ARSGQ96EG1 525 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 EFHD1Q9BUP0 239 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 IRX2Q9BZI1 471 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 TRIM9Q9C026 710 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 DCLK3Q9C098 648 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 THEGQ9P2T0 379 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GRIP1Q9Y3R0 1128 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 A0A1W2PPV4 95 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 KIAA1324LA8MWY0 1029 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PRSS46E5RG02 174 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 TRAFD1O14545 582 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 BCKDKO14874 412 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SCN2BO60939 215 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 COL8A1P27658 744 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 FCGR2BP31994 310 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GPR143P51810 404 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 HGFACQ04756 655 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CTU2Q2VPK5 515 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 THEM4Q5T1C6 240 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 RAET1LQ5VY80 246 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 BZW1Q7L1Q6 419 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 KLHDC8AQ8IYD2 350 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 LRRC75A-AS1Q8N1F1 130 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 OR13F1Q8NGS4 319 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SLC35B4Q969S0 331 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SLC7A6OSQ96CW6 309 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CHP1Q99653 195 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CPPED1Q9BRF8 314 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 WDR76Q9H967 626 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 APMAPQ9HDC9 416 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PTTG2Q9NZH5 202 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PEF1Q9UBV8 284 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SLC9A2Q9UBY0 812 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 DNAJB4Q9UDY4 337 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 FOXJ3Q9UPW0 622 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZDHHC9Q9Y397 364 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 UMODL1Q5DID0 1318 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms