RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SERPIND1P05546 499 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 DHRS4L1P0CG22 281 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 EZRP15311 586 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 SCTRP47872 440 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 CCNG1P51959 295 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ITGA1P56199 1179 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ERVPABLB-1P60509 514 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 TRAF3Q13114 568 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 EIF3IQ13347 325 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 HKDC1Q2TB90 917 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ATG14Q6ZNE5 492 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 VN1R4Q7Z5H5 301 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 MILR1Q7Z6M3 343 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 SYVN1Q86TM6 617 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 NUDCD3Q8IVD9 361 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 RNF175Q8N4F7 328 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 DTWD1Q8N5C7 304 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF655Q8N720 491 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ANKRD53Q8N9V6 530 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 MFSD9Q8NBP5 474 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 OR4F6Q8NGB9 312 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 WDR34Q96EX3 536 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 TAAR9Q96RI9 348 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 CHRNA10Q9GZZ6 450 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ACTR8Q9H981 624 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 NKIRAS1Q9NYS0 192 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 SERTAD3Q9UJW9 196 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF225Q9UK10 706 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 KCNE1BA0A087WTH5 132 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 TEX51A0A1B0GUA7 166 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 H3BQF6 201 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 FFAR3O14843 346 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 GPR42O15529 346 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 SH3BGRLO75368 114 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 OR2B3O76000 313 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 NTRK1P04629 796 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 PCNAP12004 261 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 FGF5P12034 268 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 BGNP21810 368 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 RBMS1P29558 406 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 SLC5A2P31639 672 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 GRK3P35626 688 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 RPS15AP62244 130 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 CHI3L2Q15782 390 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 CPSF6Q16630 551 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 DCAF12Q5T6F0 453 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 LETMD1Q6P1Q0 360 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 UNQ6494/PRO21346Q6UXR6 183 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 VN1R5Q7Z5H4 357 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 PPP1R3BQ86XI6 285 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 TMEM126BQ8IUX1 230 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 CSNK1A1LQ8N752 337 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 SLC46A1Q96NT5 459 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 NRSN2Q9GZP1 204 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 FANCEQ9HB96 536 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 PRM3Q9NNZ6 103 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 TNFRSF12AQ9NP84 129 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 MRPS2Q9Y399 296 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 PCDHGA8Q9Y5G5 932 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
PDLIM7-212ENST00000504380 C1QTNF9BB2RNN3 333 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF749O43361 778 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ATP8B1O43520 1251 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ITM2AO43736 263 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 SCRG1O75711 98 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 KIAA0754O94854 1291 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CLDN9O95484 217 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CHRNGP07510 517 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 C1QTNF9P0C862 333 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 NEFHP12036 1026 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ARRB2P32121 409 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 HNF4AP41235 474 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CASP2P42575 452 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 NEK2P51955 445 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 DDX39BQ13838 428 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 IL11RAQ14626 422 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 RTP5Q14D33 572 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 ZRSR2Q15696 482 aaKnown RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 TBCCQ15814 346 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 HIST2H2ACQ16777 129 aaPredicted RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 SGO1Q5FBB7 561 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 TCHHL1Q5QJ38 904 aaPredicted RBP12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 HIST2H2AA3Q6FI13 130 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 GRHL2Q6ISB3 625 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 MED27Q6P2C8 311 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 TMIGD1Q6UXZ0 262 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 CEACAM20Q6UY09 585 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
PDLIM7-212ENST00000504380 GPRIN3Q6ZVF9 776 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms