RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ABHD11Q8NFV4 315 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 OR6X1Q8NH79 312 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 HUS1BQ8NHY5 278 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 SELENOMQ8WWX9 145 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 DLG3Q92796 817 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 LRRC39Q96DD0 335 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CCDC126Q96EE4 140 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CERS2Q96G23 380 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TBATAQ96M53 351 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 KREMEN1Q96MU8 473 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF385AQ96PM9 386 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TSSK3Q96PN8 268 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CDCA3Q99618 268 aaPredicted RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 EBF4Q9BQW3 602 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 C1QTNF6Q9BXI9 259 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RNF208Q9H0X6 261 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CRISPLD1Q9H336 500 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 R3HDMLQ9H3Y0 253 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 UNKLQ9H9P5 680 aaKnown RBP3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 PXMP2Q9NR77 195 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TUBG2Q9NRH3 451 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 TAS2R13Q9NYV9 303 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 MPP6Q9NZW5 540 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 RBPJLQ9UBG7 517 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 OR12D3Q9UGF7 316 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 CDH9Q9ULB4 789 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 NENFQ9UMX5 172 aa3.57□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF638Q14966 1978 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIOBPQ9H2D6 2365 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NEMP2A6NFY4 417 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 IFITM10A6NMD0 228 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNU1A8MYU2 1149 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 L7N2F9 121 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PPEF2O14830 753 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DFNA5O60443 496 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SNAP91O60641 907 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PPP1R11O60927 126 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TULP3O75386 442 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RECQL4O94761 1208 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CST3P01034 146 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CST1P01037 141 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FTH1P02794 183 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 THP07101 528 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HTR1AP08908 422 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RNH1P13489 461 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ADRB3P13945 408 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NCK1P16333 377 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LBX1P52954 281 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ERVK-8P63133 956 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RPL38P63173 70 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FCHO2Q0JRZ9 810 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 BST2Q10589 180 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CNTN1Q12860 1018 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC13A2Q13183 592 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF460Q14592 562 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SNX17Q15036 470 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ACOX1Q15067 660 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GRK1Q15835 563 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HIST2H2ACQ16777 129 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TIGD6Q17RP2 521 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VPS26BQ4G0F5 336 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CTXN3Q4LDR2 81 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR158Q5T848 1215 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HIST2H2AA3Q6FI13 130 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GALNT18Q6P9A2 607 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TRMT10BQ6PF06 316 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DOK6Q6PKX4 331 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MOXD1Q6UVY6 613 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CASP12Q6UXS9 341 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KYAT3Q6YP21 454 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TPGS1Q6ZTW0 290 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GDPD3Q7L5L3 318 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KRT74Q7RTS7 529 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR155Q7Z3F1 870 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PIWIL3Q7Z3Z3 882 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF605Q86T29 641 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PIGZQ86VD9 579 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PHACTR4Q8IZ21 702 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SFRP1Q8N474 314 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZMIZ2Q8NF64 920 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OR13F1Q8NGS4 319 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OR52J3Q8NH60 311 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ST8SIA4Q92187 359 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ART4Q93070 314 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HDAC10Q969S8 669 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MFSD3Q96ES6 412 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF845Q96IR2 970 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CNDP2Q96KP4 475 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL32Q96NJ5 620 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNC2Q96PR1 638 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RNF157Q96PX1 679 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PTPN18Q99952 460 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDHAC1Q9H158 963 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ACSS3Q9H6R3 686 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VRTNQ9H8Y1 702 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNK12Q9HB15 430 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GOLGA2P5Q9HBQ8 144 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CPNE5Q9HCH3 593 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PDGFCQ9NRA1 345 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SNX15Q9NRS6 342 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms