RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PCDH7O60245 1069 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 LZTS3O60299 673 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 SCN2BO60939 215 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 UGT2B11O75310 529 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ZNF682O95780 498 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 CLIC3O95833 236 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 FABP3P05413 133 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 MYCLP1P12525 358 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 EEF1B2P24534 225 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 WNT3P56703 355 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 TBPL1P62380 186 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ZNF763Q0D2J5 394 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 RPA4Q13156 261 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ELOAQ14241 798 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 PLCL1Q15111 1095 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 TMEM52BQ4KMG9 183 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 OR2T5Q6IEZ7 315 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 DHRS4L2Q6PKH6 230 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 SLCO4C1Q6ZQN7 724 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 KCTD8Q6ZWB6 473 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 EIF3MQ7L2H7 374 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 GPR155Q7Z3F1 870 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 TMPRSS11BQ86T26 416 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 HORMAD1Q86X24 394 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 TRAPPC5Q8IUR0 188 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ETFBKMTQ8IXQ9 262 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 LAS2Q8IYD9 372 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ZZZ3Q8IYH5 903 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 C1orf52Q8N6N3 182 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 OR2T29Q8NH02 315 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 HUS1BQ8NHY5 278 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 SETD7Q8WTS6 366 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 ING5Q8WYH8 240 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 TMIGD2Q96BF3 282 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 COQ8BQ96D53 544 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 MTERF3Q96E29 417 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 EGLN2Q96KS0 407 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 DOK1Q99704 481 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 WRAP53Q9BUR4 548 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 SGPP1Q9BX95 441 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 CCDC177Q9NQR7 707 aaPredicted RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 PRDM6Q9NQX0 595 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ADPRHL2Q9NX46 363 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ATXN10Q9UBB4 475 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 ATP6V1HQ9UI12 483 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 CDH7Q9ULB5 785 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
NUP54-202ENST00000502850 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
NUP54-202ENST00000502850 LRRK1Q38SD2 2015 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 GNG14A0A1W2PPG7 69 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PI15O43692 258 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 RPN2P04844 631 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 C1GALT1C1LP0DN25 315 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 ADRB3P13945 408 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 FPR1P21462 350 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 IGFBP5P24593 272 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PBLDP30039 288 aaPredicted RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 DNAJA1P31689 397 aaKnown RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 KDELR2P33947 212 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 RYKP34925 604 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PCGF2P35227 344 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 GRSF1Q12849 480 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP54-202ENST00000502850 DCTN2Q13561 401 aaKnown RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 KEAP1Q14145 624 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 RAB39AQ14964 217 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 C11orf91Q3C1V1 193 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 ZNF648Q5T619 568 aaPredicted RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 ZNF691Q5VV52 312 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 IKBIPQ70UQ0 350 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 CBLL1Q75N03 491 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 PIWIL3Q7Z3Z3 882 aaKnown RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 CFAP206Q8IYR0 622 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 CDC26Q8NHZ8 85 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 ZNF480Q8WV37 535 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 SLC5A11Q8WWX8 675 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
NUP54-202ENST00000502850 SAMD11Q96NU1 681 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 MBOAT4Q96T53 435 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 TPT1P8Q9HAU6 139 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 OBP2AQ9NY56 170 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 SNX5Q9Y5X3 404 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 UNC80Q8N2C7 3258 aa11.55□□□□□ -0.56
NUP54-202ENST00000502850 LOC100130705A0A1B0GUX0 176 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 LINC01553A4QN01 128 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 BCKDKO14874 412 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 KCNK5O95279 499 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 CPSF4O95639 269 aaKnown RBP11.54□□□□□ -0.56
NUP54-202ENST00000502850 SEMG1P04279 462 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 CCDC159P0C7I6 412 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 C6P13671 934 aa11.54□□□□□ -0.56
NUP54-202ENST00000502850 POU3F3P20264 500 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms