RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 KIAA1524Q8TCG1 905 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 SECTM1Q8WVN6 248 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRCCQ92733 491 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF479Q96JC4 524 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 SPATA13Q96N96 652 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 IL17FQ96PD4 163 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 HSD3B7Q9H2F3 369 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 RNF121Q9H920 327 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 SYTL2Q9HCH5 934 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 CHST11Q9NPF2 352 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 ECHDC1Q9NTX5 307 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 AGTPBP1Q9UPW5 1226 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 FOXA2Q9Y261 457 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 PLB1Q6P1J6 1458 aa4.85□□□□□ -1.63
HMGB1P3-201ENST00000502802 EPRSP07814 1512 aaKnown RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 MAGEB16A2A368 324 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 ANKDD1BA6NHY2 528 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 C2CD4DB7Z1M9 353 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CCL24O00175 119 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TULP2O00295 520 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 ZNF197O14709 1029 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TXNL1O43396 289 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 BAG3O95817 575 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 NGFRP08138 427 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CCDC192P0DO97 292 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 IGHV4-31P0DP07 118 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 F3P13726 295 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 DESP17661 470 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CA6P23280 308 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 AHCYP23526 432 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 ALDH1B1P30837 517 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CETN2P41208 172 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 DVL1P1P54792 670 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 DMP1Q13316 513 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 OPCMLQ14982 345 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 HERC3Q15034 1050 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 CCNYL2Q5T2Q4 361 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 ANO5Q75V66 913 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRUNE1Q86TP1 453 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 SPATA2LQ8IUW3 424 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 LAX1Q8IWV1 398 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 PRSS35Q8N3Z0 413 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 EXOC6Q8TAG9 804 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 SMG7Q92540 1137 aaKnown RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 FAM46BQ96A09 425 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 DUX5Q96PT3 197 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 PKP2Q99959 881 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 DDX50Q9BQ39 737 aaKnown RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRMT61BQ9BVS5 477 aaKnown RBP4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 KRT23Q9C075 422 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 SLC39A8Q9C0K1 460 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 OR2B2Q9GZK3 357 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TSPYL1Q9H0U9 437 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TRIM10Q9UDY6 481 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 TSPAN16Q9UKR8 245 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 KCNK6Q9Y257 313 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 RIPK3Q9Y572 518 aa4.84□□□□□ -1.63
HMGB1P3-201ENST00000502802 ABCA8O94911 1581 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 PRXQ9BXM0 1461 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 C2orf92A0A1B0GVN3 265 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 PRAC2D3DTV9 90 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ACSL4O60488 711 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 NR3C1P04150 777 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 CD59P13987 128 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 CPA3P15088 417 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 GOT1P17174 413 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 CCNA2P20248 432 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 NR1D1P20393 614 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ELAVL4P26378 380 aaKnown RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ALDH4A1P30038 563 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 DUTP33316 252 aaKnown RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ART1P52961 327 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ATXN3P54252 364 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 LINC00205P59089 165 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 XKR3Q5GH77 459 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 C20orf194Q5TEA3 1177 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 AWAT2Q6E213 333 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 MFSD7Q6UXD7 560 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 C16orf82Q7Z2V1 217 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ARMC9Q7Z3E5 817 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 BATF2Q8N1L9 274 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 METTL27Q8N6F8 245 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 KLHDC1Q8N7A1 406 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 IGSF21Q96ID5 467 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 FAM111AQ96PZ2 611 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 PRMT1Q99873 361 aaKnown RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 FAM213AQ9BRX8 229 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 ALKBH7Q9BT30 221 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 TEX13AQ9BXU3 409 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 NACAP1Q9BZK3 213 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 CPVLQ9H3G5 476 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 EVA1AQ9H8M9 152 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 UPF2Q9HAU5 1272 aaKnown RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 RAVER2Q9HCJ3 691 aaKnown RBP4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC12A6Q9UHW9 1150 aa4.83□□□□□ -1.64
HMGB1P3-201ENST00000502802 FAF1Q9UNN5 650 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms