RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 SARGQ9BW04 601 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 KLHL25Q9H0H3 589 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 RHBGQ9H310 441 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 TCF7L2Q9NQB0 619 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 DMRT3Q9NQL9 472 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 C1GALT1Q9NS00 363 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
SYNPR-215ENST00000498449 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 ARL2BPQ9Y2Y0 163 aa13.19□□□□□ -0.3
SYNPR-215ENST00000498449 SPTBP11277 2137 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ATP6AP2A0A1C7CYW4 349 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 A0A1W2PQM1 296 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 C4orf47A7E2U8 309 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SLC28A1O00337 649 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CASC3O15234 703 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 OR1F1O43749 312 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 KIF1CO43896 1103 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SH3BP5O60239 455 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 LCMT2O60294 686 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ATP6AP2O75787 350 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 C9P02748 559 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 HSD3B1P14060 373 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 EZRP15311 586 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ST6GAL1P15907 406 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CKMT2P17540 419 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 HSD3B2P26439 372 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SERPINB1P30740 379 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 BCL6P41182 706 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 PIK3CBP42338 1070 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CCL7P80098 99 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CSTF3Q12996 717 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SQSTM1Q13501 440 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ZIC1Q15915 447 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 LSM12Q3MHD2 195 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 WDR74Q6RFH5 385 aaPredicted RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 Q6ZSR9 355 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 USP53Q70EK8 1073 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CACNA2D3Q8IZS8 1091 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 TBC1D19Q8N5T2 526 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 C19orf47Q8N9M1 422 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 MFSD9Q8NBP5 474 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 HUS1BQ8NHY5 278 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 RILPQ96NA2 401 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 MTERF1Q99551 399 aaKnown RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 NUDT22Q9BRQ3 303 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SYNPO2LQ9H987 977 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 RIC8BQ9NVN3 520 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 GIMAP2Q9UG22 337 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 CCL27Q9Y4X3 112 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
SYNPR-215ENST00000498449 COL27A1Q8IZC6 1860 aaPredicted RBP13.18□□□□□ -0.3
SYNPR-215ENST00000498449 SLC9B1P1A6NJY1 282 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 MAGEB17A8MXT2 336 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 FOXE1O00358 373 aaPredicted RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RGS14O43566 566 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 PRAMEF10O60809 474 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 CTSVO60911 334 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 VPS4BO75351 444 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RPLP0P05388 317 aaKnown RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 PRR35P0CG20 571 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 ACP1P24666 158 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 GSTM2P28161 218 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 AHRP35869 848 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RPS15AP62244 130 aaKnown RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RPS13P62277 151 aaKnown RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 CYP4F2P78329 520 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 PHEXP78562 749 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RELAQ04206 551 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 NR6A1Q15406 480 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 IMPG1Q17R60 797 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 NXNQ6DKJ4 435 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 LARP4Q71RC2 724 aaKnown RBP eCLIP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 RNF44Q7L0R7 432 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 CARFQ8N187 725 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 GBP7Q8N8V2 638 aaPredicted RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 ANKS4BQ8N8V4 417 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 TTLQ8NG68 377 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 CEP70Q8NHQ1 597 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 TUBGCP3Q96CW5 907 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 AKTIPQ9H8T0 292 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 BRF2Q9HAW0 419 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 KLHL3Q9UH77 587 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 ADGRE2Q9UHX3 823 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 PILRAQ9UKJ1 303 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 ATXN7L1Q9ULK2 861 aaPredicted RBP13.17□□□□□ -0.3
SYNPR-215ENST00000498449 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
SYNPR-215ENST00000498449 IGHV5-51A0A0C4DH38 117 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms