RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TRIM44Q96DX7 344 aaPredicted RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 IGSF21Q96ID5 467 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 TSSK2Q96PF2 358 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 TUBA1CQ9BQE3 449 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 ZPBPQ9BS86 351 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 TMEM204Q9BSN7 226 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 LRRC1Q9BTT6 524 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 OR2B2Q9GZK3 357 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 SHARPINQ9H0F6 387 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 NAPBQ9H115 298 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 DPEP2Q9H4A9 486 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 TFB2MQ9H5Q4 396 aaKnown RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 BICC1Q9H694 974 aaKnown RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 FKRPQ9H9S5 495 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 CHST11Q9NPF2 352 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 MRPL17Q9NRX2 175 aaKnown RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 FGF21Q9NSA1 209 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 ECHDC1Q9NTX5 307 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 HPF1Q9NWY4 346 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 HMG20BQ9P0W2 317 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 SPASTQ9UBP0 616 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 MAD2L2Q9UI95 211 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 TRMT6Q9UJA5 497 aaKnown RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 PIN4Q9Y237 131 aaKnown RBP3.35□□□□□ -1.87
CALD1-224ENST00000498254 NUDCQ9Y266 331 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 ZNF510Q9Y2H8 683 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 COLEC10Q9Y6Z7 277 aa3.35□□□□□ -1.87
CALD1-224ENST00000498254 C2orf92A0A1B0GVN3 265 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 MAGEB16A2A368 324 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CCDC162PA2VCL2 907 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 SLC9B1P1A6NJY1 282 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ZNF197O14709 1029 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 SLC22A2O15244 555 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 PSMD3O43242 534 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 OAZ2O95190 189 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CXCL14O95715 111 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 BMP15O95972 392 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CALCAP01258 141 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 APOHP02749 345 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 IGKV2-30P06310 120 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CCDC192P0DO97 292 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 IGHV4-31P0DP07 118 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CETPP11597 493 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ETS1P14921 441 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 FERP16591 822 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 DESP17661 470 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ALDH4A1P30038 563 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 SFNP31947 248 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CETN2P41208 172 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ATXN3P54252 364 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 SLC34A1Q06495 639 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CDH18Q13634 790 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 PDE7AQ13946 482 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 RBM39Q14498 530 aaKnown RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 CCDC142Q17RM4 750 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 KIF19Q2TAC6 998 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 TTC31Q49AM3 519 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 TAF1BQ53T94 588 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 TOR1AIP1Q5JTV8 583 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 C9orf57Q5W0N0 161 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 OR6B2Q6IFH4 312 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 PRSS57Q6UWY2 283 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 WDR88Q6ZMY6 472 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 C1orf186Q6ZWK4 172 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 MARK2Q7KZI7 788 aaKnown RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 MIER3Q7Z3K6 550 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 C5orf24Q7Z6I8 188 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ADAMTSL2Q86TH1 951 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ISCA2Q86U28 154 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 BATF2Q8N1L9 274 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 HDDC3Q8N4P3 179 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 OR13C3Q8NGS6 347 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 OR4A16Q8NH70 328 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 EXOC6Q8TAG9 804 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 METTL21AQ8WXB1 218 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 TAF4BQ92750 862 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 GGHQ92820 318 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 CFAP36Q96G28 342 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 ST6GAL2Q96JF0 529 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 FAM111AQ96PZ2 611 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 C1QTNF4Q9BXJ3 329 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 TEX13AQ9BXU3 409 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 DDX47Q9H0S4 455 aaKnown RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 CARD9Q9H257 536 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 EVA1AQ9H8M9 152 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 RAVER2Q9HCJ3 691 aaKnown RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 GPN1Q9HCN4 374 aaPredicted RBP3.34□□□□□ -1.87
CALD1-224ENST00000498254 ACTR3BQ9P1U1 418 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 AGTPBP1Q9UPW5 1226 aa3.34□□□□□ -1.87
CALD1-224ENST00000498254 IGLV9-49A0A0B4J1Y8 123 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 A0A1W2PN81 502 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 RGSL1A5PLK6 1076 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 FAM149AA5PLN7 773 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 SNURFLB1AK76 121 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 CIDEAO60543 219 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 LETM1O95202 739 aaPredicted RBP3.33□□□□□ -1.88
CALD1-224ENST00000498254 PPP1R3DO95685 299 aa3.33□□□□□ -1.88
CALD1-224ENST00000498254 PTBP3O95758 552 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms