RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DDHD2O94830 711 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 GLCEO94923 617 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 BAG3O95817 575 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 PNPP00491 289 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 YES1P07947 543 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 SP1P08047 785 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 SP9P0CG40 484 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 ERVK-10P10266 1014 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 PRKAR1AP10644 381 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 KRT3P12035 628 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 HLA-DPA1P20036 260 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 SSTR1P30872 391 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 CTNNB1P35222 781 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 DNA2P51530 1060 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 ARF5P84085 180 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 AKAP17AQ02040 695 aaKnown RBP3.6□□□□□ -1.83
SMC4-225ENST00000497203 SGCGQ13326 291 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 TRIM29Q14134 588 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 TEAD2Q15562 447 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 GTDC1Q4AE62 458 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 PODNL1Q6PEZ8 512 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 FAM89BQ8N5H3 189 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 KLHDC1Q8N7A1 406 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 KIAA0895Q8NCT3 520 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 ZNF524Q96C55 264 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 SENP5Q96HI0 755 aaPredicted RBP3.6□□□□□ -1.83
SMC4-225ENST00000497203 SHARPINQ9H0F6 387 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 RPF1Q9H9Y2 349 aaKnown RBP3.6□□□□□ -1.83
SMC4-225ENST00000497203 RAVER2Q9HCJ3 691 aaKnown RBP3.6□□□□□ -1.83
SMC4-225ENST00000497203 MID1IP1Q9NPA3 183 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 GPR173Q9NS66 373 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 EXOC1Q9NV70 894 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 NOCTQ9UK39 431 aaKnown RBP3.6□□□□□ -1.83
SMC4-225ENST00000497203 KLK4Q9Y5K2 254 aa3.6□□□□□ -1.83
SMC4-225ENST00000497203 PMS2P5A8MQ11 134 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 SLCO1B7G3V0H7 640 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 DDX39AO00148 427 aaKnown RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 TTI1O43156 1089 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 ATP9AO75110 1047 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 NGFP01138 241 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 ATP1B1P05026 303 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 GPIP06744 558 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 F3P13726 295 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 VCLP18206 1134 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 TIMP3P35625 211 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CLDN17P56750 224 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 KIAA1024LP59773 190 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 PPA1Q15181 289 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CDC37Q16543 378 aaPredicted RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 GPR33Q49SQ1 333 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 SLC25A53Q5H9E4 307 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 FGD3Q5JSP0 725 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 ZNF790Q6PG37 636 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 TMEM207Q6UWW9 146 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 FCRLAQ7L513 359 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CCDC83Q8IWF9 413 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 KLHDC8AQ8IYD2 350 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 LSMEM2Q8N112 164 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CARNMT1Q8N4J0 409 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 GBP7Q8N8V2 638 aaPredicted RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 SLC37A3Q8NCC5 494 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 LPCAT1Q8NF37 534 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 GPRC5AQ8NFJ5 357 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 OR4C15Q8NGM1 316 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 OR4C3Q8NH37 302 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CABS1Q96KC9 395 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 LPAR4Q99677 370 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 IDI2Q9BXS1 227 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 CACNG6Q9BXT2 260 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 AKIRIN1Q9H9L7 192 aaPredicted RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 SLC52A3Q9NQ40 469 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 PHPT1Q9NRX4 125 aaPredicted RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 CWC25Q9NXE8 425 aaPredicted RBP3.59□□□□□ -1.83
SMC4-225ENST00000497203 SPG21Q9NZD8 308 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 PRDM4Q9UKN5 801 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 FBXW2Q9UKT8 454 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 STX8Q9UNK0 236 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 KNSTRNQ9Y448 316 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 PFASO15067 1338 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 STK36Q9NRP7 1315 aa3.59□□□□□ -1.83
SMC4-225ENST00000497203 KIAA1210Q9ULL0 1709 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 WDR81Q562E7 1941 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 KIAA1217Q5T5P2 1943 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 IGHV4-4A0A075B6R2 117 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 PRR23AA6NEV1 266 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 KINO60870 393 aaKnown RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 TRMUO75648 421 aaKnown RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 CDC123O75794 336 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 AP2A2O94973 939 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 NADKO95544 446 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 PAK4O96013 591 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 FAM157CP0CG43 387 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 SLC2A2P11168 524 aaPredicted RBP3.58□□□□□ -1.84
SMC4-225ENST00000497203 CD59P13987 128 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 ALDH1B1P30837 517 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 CDKN1AP38936 164 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 OR3A1P47881 315 aa3.58□□□□□ -1.84
SMC4-225ENST00000497203 RPA4Q13156 261 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms