RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 TAAR2Q9P1P5 351 aa8.07□□□□□ -1.12
USP54-215ENST00000497106 PDPK1O15530 556 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 E2F6O75461 281 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 DRD2P14416 443 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 PRPH2P23942 346 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 METAP1P53582 386 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CYP4F2P78329 520 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TAF11Q15544 211 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 DUOXA1Q1HG43 343 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 SLCO4C1Q6ZQN7 724 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TREML1Q86YW5 311 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 GOLM1Q8NBJ4 401 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 HUS1BQ8NHY5 278 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 NAT14Q8WUY8 206 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 OR1E3Q8WZA6 343 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 HSPA12BQ96MM6 686 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 KCNC2Q96PR1 638 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 FGF22Q9HCT0 170 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 DMRT3Q9NQL9 472 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ANAPC2Q9UJX6 822 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CDC14AQ9UNH5 594 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TSC22D4Q9Y3Q8 395 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 A0A0J9YY10 115 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 SYNDIG1LA6NDD5 238 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 BCAT2O15382 392 aaPredicted RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 PDE5AO76074 875 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 FASP25445 335 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 AVPR1BP47901 424 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 AFF3P51826 1226 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 ARFIP1P53367 373 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 HHEXQ03014 270 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CAPRIN2Q6IMN6 1127 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 KIAA2013Q8IYS2 634 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 GPR135Q8IZ08 494 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 PELI3Q8N2H9 469 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 MINDY1Q8N5J2 469 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 OR7G3Q8NG95 312 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 MOAP1Q96BY2 351 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 LRRC58Q96CX6 371 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 REEP4Q9H6H4 257 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 SERGEFQ9UGK8 458 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 PPT2Q9UMR5 302 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 FAM32AQ9Y421 112 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 A0A096LPI6 279 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 AQP12BA6NM10 295 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TLR4O00206 839 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 IGLV3-19P01714 112 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 GPIP06744 558 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 BCKDHAP12694 445 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CNR2P34972 360 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 PRDX1Q06830 199 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 TRIM25Q14258 630 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 GRB7Q14451 532 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 KHDRBS2Q5VWX1 349 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 ASRGL1Q7L266 308 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 AQP12AQ8IXF9 295 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 NEIL2Q969S2 332 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ZUFSPQ96AP4 578 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ASB9Q96DX5 294 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 IL17FQ96PD4 163 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ARMC7Q9H6L4 198 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 HRASLS2Q9NWW9 162 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TMPRSS11EQ9UL52 423 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 MYO7AQ13402 2215 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TRBV23OR9-2A0A075B6M9 112 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CCDC163A0A0D9SF12 145 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 MAGEB17A8MXT2 336 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 DUX1O43812 170 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 PGRP06401 933 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 ACADLP28330 430 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TSFMP43897 325 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 HTR6P50406 440 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 UFM1P61960 85 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 DAB2P98082 770 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 TOR1AIP1Q5JTV8 583 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 TCHHL1Q5QJ38 904 aaPredicted RBP8.06□□□□□ -1.12
USP54-215ENST00000497106 IRGCQ6NXR0 463 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 OR2T12Q8NG77 320 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 OR13H1Q8NG92 308 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CGREF1Q99674 301 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 CPNE7Q9UBL6 633 aa8.06□□□□□ -1.12
USP54-215ENST00000497106 UBFD1O14562 309 aaKnown RBP8.05□□□□□ -1.12
USP54-215ENST00000497106 LSM1O15116 133 aaKnown RBP8.05□□□□□ -1.12
USP54-215ENST00000497106 HNRNPRO43390 633 aaKnown RBP8.05□□□□□ -1.12
USP54-215ENST00000497106 MGRN1O60291 552 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 RASSF9O75901 435 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 TGFB1P01137 390 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 NEK2P51955 445 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 MAPK10P53779 464 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 FOXA1P55317 472 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 ABI3BPQ7Z7G0 1075 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
USP54-215ENST00000497106 PJA1Q8NG27 643 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 DNAJB14Q8TBM8 379 aa8.05□□□□□ -1.12
USP54-215ENST00000497106 TESCQ96BS2 214 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms