RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CETN2P41208 172 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 LIMK1P53667 647 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 PRKG2Q13237 762 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 SNTB1Q13884 538 aaKnown RBP2.55□□□□□ -2
VPS26A-208ENST00000497022 ZNF146Q15072 292 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 NONOQ15233 471 aaKnown RBP eCLIP2.55□□□□□ -2
VPS26A-208ENST00000497022 LETM2Q2VYF4 491 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 FAM182AQ5T1J6 154 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 CTR9Q6PD62 1173 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 ZBTB49Q6ZSB9 765 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 TIPARPQ7Z3E1 657 aaKnown RBP2.55□□□□□ -2
VPS26A-208ENST00000497022 SLC4A11Q8NBS3 891 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 OTUB1Q96FW1 271 aaPredicted RBP2.55□□□□□ -2
VPS26A-208ENST00000497022 BTBD9Q96Q07 612 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 ATF6BQ99941 703 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 PI4K2AQ9BTU6 479 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 APOL6Q9BWW8 343 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 DNAI2Q9GZS0 605 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 TSPAN16Q9UKR8 245 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 TRPV2Q9Y5S1 764 aa2.55□□□□□ -2
VPS26A-208ENST00000497022 SPATA31D1Q6ZQQ2 1576 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 PASKQ96RG2 1323 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 IGHV3-38A0A0C4DH36 116 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 MTMR11A4FU01 709 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 CLDN4O14493 209 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 TRAFD1O14545 582 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 ECE2O60344 883 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 GSRP00390 522 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 NR2F1P10589 423 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 EDNRAP25101 427 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 OR1D5P58170 312 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 ALCAMQ13740 583 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 EIPR1Q53HC9 387 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 OR4C11Q6IEV9 310 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 CENPVQ7Z7K6 275 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 MAML2Q8IZL2 1156 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 TCEANCQ8N8B7 351 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 LRTM2Q8N967 370 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 SUMF1Q8NBK3 374 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 OR52B6Q8NGF0 335 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 CHURC1Q8WUH1 139 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 ROBO4Q8WZ75 1007 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 TSACCQ96A04 125 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 LINC00615Q96LM1 132 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 PSMB7Q99436 277 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 SDCBP2Q9H190 292 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 ACTL8Q9H568 366 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 TBC1D13Q9NVG8 400 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 HACD3Q9P035 362 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 TBC1D7Q9P0N9 293 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 ZNF107Q9UII5 783 aaPredicted RBP2.54□□□□□ -2
VPS26A-208ENST00000497022 FAM169AQ9Y6X4 670 aa2.54□□□□□ -2
VPS26A-208ENST00000497022 IGHV3-20A0A0C4DH32 117 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 GLTPD2A6NH11 291 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 AP5Z1O43299 807 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 AHCYL1O43865 530 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 CYTIPO60759 359 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 HPP00738 406 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 DUX4L4P0CJ87 422 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 SELEP16581 610 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 AZGP1P25311 298 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 CSE1LP55060 971 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 ERVK-16P61578 105 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 IFI35P80217 286 aaPredicted RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 FKBP3Q00688 224 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 RBPJQ06330 500 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 RALGDSQ12967 914 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 MAPRE1Q15691 268 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 ALDH1L2Q3SY69 923 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 RNF212Q495C1 297 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 CYB5D1Q6P9G0 228 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 CPEB2Q7Z5Q1 589 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 IQCHQ86VS3 1027 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 KCNMB4Q86W47 210 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 RNF130Q86XS8 419 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 OR4N5Q8IXE1 308 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 GBP7Q8N8V2 638 aaPredicted RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 TYMSOSQ8TAI1 123 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 SECISBP2LQ93073 1101 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 LRRC3BQ96PB8 259 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 NDNQ99608 321 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 ADNPQ9H2P0 1102 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 RAVER2Q9HCJ3 691 aaKnown RBP2.53□□□□□ -2
VPS26A-208ENST00000497022 NLGN3Q9NZ94 848 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 MORF4L1Q9UBU8 362 aa2.53□□□□□ -2
VPS26A-208ENST00000497022 IL16Q14005 1332 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 ZNF840PA6NDX5 716 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 SH3BP5O60239 455 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 SAP30O75446 220 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 TADA2AO75478 443 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 PSMD10O75832 226 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 CELF2O95319 508 aaKnown RBP2.52□□□□□ -2.01
VPS26A-208ENST00000497022 SERPING1P05155 500 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 OR52Z1P0C646 297 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 PCP11498 1178 aaKnown RBP2.52□□□□□ -2.01
VPS26A-208ENST00000497022 EEF1B2P24534 225 aaKnown RBP2.52□□□□□ -2.01
VPS26A-208ENST00000497022 PRELPP51888 382 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 NDST2P52849 883 aa2.52□□□□□ -2.01
VPS26A-208ENST00000497022 UBASH3AP57075 661 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms