RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	OTUB1	Q96FW1	271 aa	Predicted RBP	4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	LINC00615	Q96LM1	132 aa	Predicted RBP	4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	KLHL5	Q96PQ7	755 aa		4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	SDCBP2	Q9H190	292 aa		4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	HEXA-AS1	Q9H8Q6	139 aa		4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	TBC1D7	Q9P0N9	293 aa		4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	IL16	Q14005	1332 aa		4.71	□□□□□ -1.66
TARDBP-210	ENST00000496840	AP5Z1	O43299	807 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	TIMM44	O43615	452 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	POP4	O95707	220 aa	Known RBP	4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	FOLR2	P14207	255 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	ETV5	P41161	510 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	ZFP36L1	Q07352	338 aa	Known RBP	4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	BECN1	Q14457	450 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	SPECC1	Q5M775	1068 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	TSACC	Q96A04	125 aa	Predicted RBP	4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	BTBD9	Q96Q07	612 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	PSMB7	Q99436	277 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	TSPAN16	Q9UKR8	245 aa		4.7	□□□□□ -1.66
TARDBP-210	ENST00000496840	CCL24	O00175	119 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	TRAFD1	O14545	582 aa	Predicted RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	TLX2	O43763	284 aa	Predicted RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	PSMD10	O75832	226 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	GSR	P00390	522 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	CENPB	P07199	599 aa	Predicted RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	KRTAP1-4	P0C5Y4	121 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	DNAH10OS	P0CZ25	163 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	OXTR	P30559	389 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	RBPJ	Q06330	500 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	CD300C	Q08708	224 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	ACSM1	Q08AH1	577 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	ILF2	Q12905	390 aa	Known RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	ZNF841	Q6ZN19	808 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	HPS6	Q86YV9	775 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	XXYLT1	Q8NBI6	393 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	ERP27	Q96DN0	273 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	C1orf147	Q96MC9	270 aa	Predicted RBP	4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	ATF6B	Q99941	703 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	CHCHD5	Q9BSY4	110 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	DNAI2	Q9GZS0	605 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	GTSE1	Q9NYZ3	720 aa		4.69	□□□□□ -1.66
TARDBP-210	ENST00000496840	IGLV3-10	A0A075B6K4	115 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	MTMR11	A4FU01	709 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	SYNDIG1L	A6NDD5	238 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	CELF2	O95319	508 aa	Known RBP	4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	ADRB2	P07550	413 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	EDNRA	P25101	427 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	OR1D5	P58170	312 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	DLK1	P80370	383 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	NUCB1	Q02818	461 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	FCHO2	Q0JRZ9	810 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	NONO	Q15233	471 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	ERMARD	Q5T6L9	678 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	KRT39	Q6A163	491 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	TLK2	Q86UE8	772 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	OR8H2	Q8N162	312 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	LSMEM1	Q8N8F7	131 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	RAVER2	Q9HCJ3	691 aa	Known RBP	4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	TBC1D13	Q9NVG8	400 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	GPR83	Q9NYM4	423 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	IL36A	Q9UHA7	158 aa		4.68	□□□□□ -1.66
TARDBP-210	ENST00000496840	IGLV4-3	A0A075B6K6	122 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	CYTIP	O60759	359 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	TADA2A	O75478	443 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	IL11	P20809	199 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	ALDH1B1	P30837	517 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	MC5R	P33032	325 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	CAPZA2	P47755	286 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	RAB28	P51157	221 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	SEL1L3	Q68CR1	1132 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	SLC25A42	Q86VD7	318 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	LRTM2	Q8N967	370 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	SLC4A11	Q8NBS3	891 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	HDAC11	Q96DB2	347 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	ZNF577	Q9BSK1	485 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	PI4K2A	Q9BTU6	479 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	NKIRAS2	Q9NYR9	191 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	HACD3	Q9P035	362 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	TTLL3	Q9Y4R7	772 aa		4.67	□□□□□ -1.66
TARDBP-210	ENST00000496840	IGHV3-20	A0A0C4DH32	117 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	IGHV3-38	A0A0C4DH36	116 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	BCL3	P20749	454 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	HSD17B3	P37058	310 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	PTGIS	Q16647	500 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	FGD3	Q5JSP0	725 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	PLPPR4	Q7Z2D5	763 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	GBP7	Q8N8V2	638 aa	Predicted RBP	4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	ZPLD1	Q8TCW7	415 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	SNRNP27	Q8WVK2	155 aa	Known RBP	4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	SPSB1	Q96BD6	273 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	ZNF597	Q96LX8	424 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	CFAP57	Q96MR6	1250 aa		4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.66	□□□□□ -1.66
TARDBP-210	ENST00000496840	OR52Z1	P0C646	297 aa		4.65	□□□□□ -1.67
TARDBP-210	ENST00000496840	CD59	P13987	128 aa		4.65	□□□□□ -1.67
TARDBP-210	ENST00000496840	ACHE	P22303	614 aa		4.65	□□□□□ -1.67

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