RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SPATA9Q9BWV2 254 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TOR3AQ9H497 397 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TRPV4Q9HBA0 871 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 DMRT3Q9NQL9 472 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 GDE1Q9NZC3 331 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 CORO2BQ9UQ03 480 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 BTBD3Q9Y2F9 522 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PCDHB11Q9Y5F2 797 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 DOCK8Q8NF50 2099 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 GABRR3A8MPY1 467 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 YY2O15391 372 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 KCNK5O95279 499 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 C1QCP02747 245 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 EPHX1P07099 455 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 IDSP22304 550 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PPIBP23284 216 aaKnown RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 DCTP40126 519 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 OPRD1P41143 372 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 CDK9P50750 372 aaKnown RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ERVK-21P61565 698 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TAP2Q03519 686 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF763Q0D2J5 394 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 LRRC74AQ0VAA2 488 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 BIRC2Q13490 618 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 HIST2H2ACQ16777 129 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TTC23Q5W5X9 447 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 HIST2H2AA3Q6FI13 130 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ADAMTSL4Q6UY14 1074 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PDZD3Q86UT5 571 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PTOV1Q86YD1 416 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ZDHHC21Q8IVQ6 265 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 HS3ST5Q8IZT8 346 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF555Q8NEP9 628 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 COX14Q96I36 57 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 ZDHHC5Q9C0B5 715 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 OR52A5Q9H2C5 316 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 SMURF2Q9HAU4 748 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 TPT1P8Q9HAU6 139 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 PRSS16Q9NQE7 514 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 SIRT5Q9NXA8 310 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 THAP10Q9P2Z0 257 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-220ENST00000496711 RPS6KA6Q9UK32 745 aa12.57□□□□□ -0.4
GARNL3-220ENST00000496711 C1orf226A1L170 272 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 NOBOXO60393 691 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-220ENST00000496711 SHMT2P34897 504 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 PHEXP78562 749 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 PIP5KL1Q5T9C9 394 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 NXPE4Q6UWF7 544 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 VITQ6UXI7 678 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 FAM83HQ6ZRV2 1179 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-220ENST00000496711 HIPK1Q86Z02 1210 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 C8orf59Q8N0T1 100 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-220ENST00000496711 PLA2G15Q8NCC3 412 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 PNPT1Q8TCS8 783 aaKnown RBP12.56□□□□□ -0.4
GARNL3-220ENST00000496711 COQ8BQ96D53 544 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 ERLEC1Q96DZ1 483 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 ING2Q9H160 280 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 ERVK-11Q9UQG0 969 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 ASF1AQ9Y294 204 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 GMEB1Q9Y692 573 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
GARNL3-220ENST00000496711 RNASET2O00584 256 aaKnown RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 HS6ST1O60243 411 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SLC5A2P31639 672 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 HLCSP50747 726 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 RPA4Q13156 261 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 GAB1Q13480 694 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 VEZF1Q14119 521 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SPIDRQ14159 915 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ZBED5Q49AG3 693 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PRAMEF14Q5SWL7 426 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 FAM46CQ5VWP2 391 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 COMMD6Q7Z4G1 85 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TMEM179BQ7Z7N9 219 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 HEATR4Q86WZ0 1026 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 DCUN1D3Q8IWE4 304 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 SYNPOQ8N3V7 929 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 OR10Q1Q8NGQ4 319 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 RAD51AP1Q96B01 352 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 TBC1D20Q96BZ9 403 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 NPLQ9BXD5 320 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 BHLHE41Q9C0J9 482 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 GABARAPL1Q9H0R8 117 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 CHST8Q9H2A9 424 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ZDHHC4Q9NPG8 344 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 DZANK1Q9NVP4 752 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 FAM118AQ9NWS6 357 aa12.55□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF282Q9UDV7 671 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-220ENST00000496711 C3orf18Q9UK00 162 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms