RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CBX6O95503 412 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 HEXBP07686 556 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PRR35P0CG20 571 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 CDH1P12830 882 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 HRH2P25021 359 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 EMP2P54851 167 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 GNG11P61952 73 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 RPS15AP62244 130 aaKnown RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 NAE1Q13564 534 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 FASTKD3Q14CZ7 662 aaKnown RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 IRAK1BP1Q5VVH5 260 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 TMEM205Q6UW68 189 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 LCTLQ6UWM7 567 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 LINC00696Q6ZRV3 163 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 NDUFAF7Q7L592 441 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 OR9A4Q8NGU2 314 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 GABPB2Q8TAK5 448 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 BRIX1Q8TDN6 353 aaKnown RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PSMF1Q92530 271 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 TM4SF19Q96DZ7 209 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 NAPGQ99747 312 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PCBD2Q9H0N5 130 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
VTI1A-209ENST00000496445 PSAT1Q9Y617 370 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 CENPEQ02224 2701 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
VTI1A-209ENST00000496445 LOC102723996A0A087X1L8 192 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 E2F3O00716 465 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 BMP10O95393 424 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 NSA2O95478 260 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 NPPBP16860 134 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 IL1RNP18510 177 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 TSFMP43897 325 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 AVPR1BP47901 424 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 GLRBP48167 497 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 MFAP5Q13361 173 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 FRG1Q14331 258 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF169Q14929 603 aaPredicted RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 NDUFA9Q16795 377 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 TMEM207Q6UWW9 146 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 C17orf64Q86WR6 236 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 PDSS2Q86YH6 399 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 PALM2Q8IXS6 379 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 KBTBD2Q8IY47 623 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 ALKBH8Q96BT7 664 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 PYCR2Q96C36 320 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 LRRC39Q96DD0 335 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 OR4K3Q96R72 315 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 COPG1Q9Y678 874 aaKnown RBP13.52□□□□□ -0.25
VTI1A-209ENST00000496445 SAR1BQ9Y6B6 198 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 SCN2AQ99250 2005 aa13.52□□□□□ -0.25
VTI1A-209ENST00000496445 E7ESA3 106 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 H0YIG0 161 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 PYGBP11216 843 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 CCND1P24385 295 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 ARL4CP56559 192 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 IL2P60568 153 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 MEF2AQ02078 507 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-209ENST00000496445 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 HIST2H2BCQ6DN03 193 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 CAPN13Q6MZZ7 669 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-209ENST00000496445 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 ASPGQ86U10 573 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 SLC26A11Q86WA9 606 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 SIRT6Q8N6T7 355 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 OR56A3Q8NH54 315 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 PRR7Q8TB68 274 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 SNF8Q96H20 258 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 VN1R1Q9GZP7 353 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF700Q9H0M5 742 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 SPNS1Q9H2V7 528 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 ARL15Q9NXU5 204 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 HCN3Q9P1Z3 774 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 MKL2Q9ULH7 1088 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 VWA7Q9Y334 891 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 POLEQ07864 2286 aa13.51□□□□□ -0.25
VTI1A-209ENST00000496445 ANKUB1A6NFN9 424 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 CCDC188H7C350 402 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 SGK494L7N484 410 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 PCDH17O14917 1159 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms