RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NSA2O95478 260 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TSPAN12O95859 305 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 STATHP02808 62 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 SERPINA7P05543 415 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 PRR35P0CG20 571 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 COX6A1P12074 109 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 AP1S2P56377 157 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 AP2B1P63010 937 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MGAT5Q09328 741 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MFAP5Q13361 173 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ELOAQ14241 798 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ZNF169Q14929 603 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TLR1Q15399 786 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 NR6A1Q15406 480 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 PHKG1Q16816 387 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 SYT16Q17RD7 645 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TRMT10BQ6PF06 316 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TMEM205Q6UW68 189 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MBOAT1Q6ZNC8 495 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 VN1R4Q7Z5H5 301 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ASPGQ86U10 573 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ANKMY2Q8IV38 441 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 SSC4DQ8WTU2 575 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 METTL21AQ8WXB1 218 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 FBXL8Q96CD0 374 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MACROD1Q9BQ69 325 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TRIM51Q9BSJ1 452 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 TRIM31Q9BZY9 425 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ZNF700Q9H0M5 742 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ANKHQ9HCJ1 492 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 RIC8BQ9NVN3 520 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 ZFATQ9P243 1243 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 SLC17A6Q9P2U8 582 aa12.08□□□□□ -0.48
PTPRF-214ENST00000496043 MRPS2Q9Y399 296 aaKnown RBP12.08□□□□□ -0.48
PTPRF-214ENST00000496043 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 A0A1W2PQ72 361 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 ANKUB1A6NFN9 424 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 SEMA7AO75326 666 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 DDAH2O95865 285 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 ENO2P09104 434 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CDH1P12830 882 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 BCL6P41182 706 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 TSFMP43897 325 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CCR8P51685 355 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 EEF1A2Q05639 463 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CDC16Q13042 620 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 PDIA2Q13087 525 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 B3GNTL1Q67FW5 361 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 TMEM214Q6NUQ4 689 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 RIPOR1Q6ZS17 1223 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 SLC26A11Q86WA9 606 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 ZC3H7AQ8IWR0 971 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 NKAPQ8N5F7 415 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 TBC1D19Q8N5T2 526 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 MFSD9Q8NBP5 474 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 FBXO36Q8NEA4 188 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CATSPER1Q8NEC5 780 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 ABHD11Q8NFV4 315 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 OR4K1Q8NGD4 311 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 OR56A3Q8NH54 315 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 OR51Q1Q8NH59 317 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 PSMF1Q92530 271 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 PYCR2Q96C36 320 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CYTH2Q99418 400 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 BARD1Q99728 777 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 OLFM1Q99784 485 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 TUBB6Q9BUF5 446 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 PTGFRNQ9P2B2 879 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
PTPRF-214ENST00000496043 SH2B3Q9UQQ2 575 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 CSAG2Q9Y5P2 127 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 SLC22A7Q9Y694 548 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
PTPRF-214ENST00000496043 HEATR5BQ9P2D3 2071 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 DYTNA2CJ06 578 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 SGK494L7N484 410 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 OR1F1O43749 312 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 GUCA1CO95843 209 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 UQCRHP07919 91 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 CYC1P08574 325 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 C8orf89P0DMQ9 161 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 SAT1P21673 171 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 PGGT1BP53609 377 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 ARG2P78540 354 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 ILF2Q12905 390 aaKnown RBP12.06□□□□□ -0.48
PTPRF-214ENST00000496043 CBLBQ13191 982 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 CSHL1Q14406 222 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 PCOLCEQ15113 449 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 ZXDCQ2QGD7 858 aaPredicted RBP12.06□□□□□ -0.48
PTPRF-214ENST00000496043 MFSD4BQ5TF39 518 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 RPUSD3Q6P087 351 aaKnown RBP12.06□□□□□ -0.48
PTPRF-214ENST00000496043 STRA8Q7Z7C7 330 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 KCT2Q8NC54 265 aa12.06□□□□□ -0.48
PTPRF-214ENST00000496043 OR1N1Q8NGS0 311 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms