RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ASPGQ86U10 573 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 CCDC63Q8NA47 563 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 MFSD9Q8NBP5 474 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 SLC38A9Q8NBW4 561 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 SLC13A3Q8WWT9 602 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 EHD1Q9H4M9 534 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 TMEM216Q9P0N5 145 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 IFT80Q9P2H3 777 aaPredicted RBP11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 CDC14AQ9UNH5 594 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 SPTBP11277 2137 aa11.54□□□□□ -0.56
CSNK1E-213ENST00000495232 MAP1BP46821 2468 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 ZZEF1O43149 2961 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 FOXO6A8MYZ6 492 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 STX16-NPEPL1H3BU86 382 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 STX16O14662 325 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 RGS16O15492 202 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 NDUFS4O43181 175 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 KLK8O60259 260 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 CD63P08962 238 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 LIFP15018 202 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 EEF1DP29692 281 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 RORAP35398 523 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 AHRP35869 848 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 EMP3P54852 163 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 REEP5Q00765 189 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 RGS1Q08116 209 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 PCBP2Q15366 365 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 HKDC1Q2TB90 917 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 CCDC153Q494R4 210 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 GARNL3Q5VVW2 1013 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 MLIPQ5VWP3 458 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 C16orf46Q6P387 395 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 TMIGD1Q6UXZ0 262 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 SLCO4C1Q6ZQN7 724 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 SLC22A9Q8IVM8 553 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 SRRM1Q8IYB3 904 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 C4orf33Q8N1A6 199 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 TRPV3Q8NET8 790 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 TTLQ8NG68 377 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 CT55Q8WUE5 264 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 PTCD3Q96EY7 689 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 RUFY1Q96T51 708 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 EFCAB11Q9BUY7 163 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 TMEM109Q9BVC6 243 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 SARGQ9BW04 601 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 GPR87Q9BY21 358 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 PITHD1Q9GZP4 211 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 CHST8Q9H2A9 424 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 CENPHQ9H3R5 247 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 ENAMQ9NRM1 1142 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 ARGLU1Q9NWB6 273 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 LGALS13Q9UHV8 139 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 ZFP69BQ9UJL9 534 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 RUVBL1Q9Y265 456 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 PADI2Q9Y2J8 665 aa11.53□□□□□ -0.56
CSNK1E-213ENST00000495232 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.56
CSNK1E-213ENST00000495232 URADA6NGE7 173 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ANKDD1BA6NHY2 528 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 STATHP02808 62 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 GSTM2P28161 218 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 HPDP32754 393 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CRHR1P34998 444 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 AVPR1BP47901 424 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CXADRP78310 365 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 MC1RQ01726 317 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 VAC14Q08AM6 782 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CHIT1Q13231 466 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 PWP1Q13610 501 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 COL9A2Q14055 689 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 DOC2AQ14183 400 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 SLBPQ14493 270 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 PRTGQ2VWP7 1150 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 NKAIN1Q4KMZ8 207 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CEP85LQ5SZL2 805 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 PRMT9Q6P2P2 845 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 TRABD2AQ86V40 505 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 MYLK4Q86YV6 388 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF740Q8NDX6 193 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 PPP4R1Q8TF05 950 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CCT6BQ92526 530 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 UBE2E3Q969T4 207 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 CCDC126Q96EE4 140 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 MVB12AQ96EY5 273 aa11.52□□□□□ -0.57
CSNK1E-213ENST00000495232 ZIM3Q96PE6 472 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms