RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 DTWD1Q8N5C7 304 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SNX31Q8N9S9 440 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 MFSD9Q8NBP5 474 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 OR4K1Q8NGD4 311 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 DCAKDQ8WVC6 231 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SLC13A3Q8WWT9 602 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 FKBP10Q96AY3 582 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 MMABQ96EY8 250 aaPredicted RBP15.18■□□□□ 0.02
LIME1-209ENST00000494776 AIF1LQ9BQI0 150 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 CCDC77Q9BR77 488 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 CAPS2Q9BXY5 557 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 DRC3Q9H069 523 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SYNPO2LQ9H987 977 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 SLC22A11Q9NSA0 550 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 NUDT4Q9NZJ9 180 aa15.18■□□□□ 0.02
LIME1-209ENST00000494776 TRIM49D1C9J1S8 452 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 CLGNO14967 610 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 TAPBPO15533 448 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 STK16O75716 305 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 KLF7O75840 302 aaPredicted RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 KLHL2O95198 593 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 SFTPCP11686 197 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 GNAZP19086 355 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 ITGAXP20702 1163 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 AVPR1BP47901 424 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 SLC6A12P48065 614 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 KCNC1P48547 511 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 CDC16Q13042 620 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 SSPNQ14714 243 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 ACAP2Q15057 778 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 RBBP5Q15291 538 aaKnown RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 FBXO48Q5FWF7 155 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 VN1R4Q7Z5H5 301 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 CENPLQ8N0S6 344 aaPredicted RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 PDPRQ8NCN5 879 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 OR2Y1Q8NGV0 311 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 UBLCP1Q8WVY7 318 aaPredicted RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 ESAMQ96AP7 390 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 MVB12AQ96EY5 273 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 MACROD1Q9BQ69 325 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 TMEM79Q9BSE2 394 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 DNAJC11Q9NVH1 559 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 ZNF282Q9UDV7 671 aaPredicted RBP15.17■□□□□ 0.02
LIME1-209ENST00000494776 KCNMB2Q9Y691 235 aa15.17■□□□□ 0.02
LIME1-209ENST00000494776 MGAQ8IWI9 3026 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 A0A0A6YYC8 382 aaPredicted RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 CCDC189A1A4V9 331 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ARGFXA6NJG6 315 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 I3L1I5 382 aaPredicted RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 UBXN8O00124 270 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 NDUFS4O43181 175 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 ONECUT2O95948 504 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 C1GALT1C1LP0DN25 315 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 MYBL2P10244 700 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 CXCR2P25025 360 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 GGT5P36269 586 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 RGS1Q08116 209 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 C19orf57Q0VDD7 668 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 FAM53BQ14153 422 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 PDK4Q16654 411 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 COX15Q7KZN9 410 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 KLHDC8AQ8IYD2 350 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 EXD3Q8N9H8 876 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ZNF740Q8NDX6 193 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 RHEBL1Q8TAI7 183 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ZCCHC10Q8TBK6 192 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 SCYL1Q96KG9 808 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ATOH8Q96SQ7 321 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 TXLNGYQ9BZA5 131 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ADNPQ9H2P0 1102 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 SOX17Q9H6I2 414 aaPredicted RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 WDR54Q9H977 334 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 ACSS2Q9NR19 701 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 GPRC5BQ9NZH0 403 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 TRPC4Q9UBN4 977 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 CTSFQ9UBX1 484 aa15.16■□□□□ 0.02
LIME1-209ENST00000494776 PTBP2Q9UKA9 531 aaKnown RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 NXT1Q9UKK6 140 aaKnown RBP15.16■□□□□ 0.02
LIME1-209ENST00000494776 HEATR5BQ9P2D3 2071 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 IQANK1A0A1B0GTG1 560 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 PEX12O00623 359 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 CNOT3O75175 753 aaKnown RBP15.15■□□□□ 0.02
LIME1-209ENST00000494776 PRB1P04280 392 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 GFAPP14136 432 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 VARSP26640 1264 aaKnown RBP15.15■□□□□ 0.02
LIME1-209ENST00000494776 TNFRSF8P28908 595 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 CSRP3P50461 194 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 FOXL2P58012 376 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 REEP5Q00765 189 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 KCNAB2Q13303 367 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 NKG7Q16617 165 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 ATG9BQ674R7 924 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 SHISA6Q6ZSJ9 500 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 PRSS58Q8IYP2 241 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms