RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LMNTD2Q8IXW0 634 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ZCCHC10Q8TBK6 192 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 CALML6Q8TD86 181 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 RERGQ96A58 199 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-208ENST00000494728 PYCR2Q96C36 320 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 LINGO1Q96FE5 620 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 CERS2Q96G23 380 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 NAP1L3Q99457 506 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-208ENST00000494728 OLFM1Q99784 485 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 EBNA1BP2Q99848 306 aaKnown RBP11.03□□□□□ -0.64
VTI1A-208ENST00000494728 RBCK1Q9BYM8 510 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 TGIF2Q9GZN2 237 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 SPNS1Q9H2V7 528 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 MKKSQ9NPJ1 570 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-208ENST00000494728 C14orf105Q9NVL8 296 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 HCN3Q9P1Z3 774 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 PTGFRNQ9P2B2 879 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 ASIC3Q9UHC3 531 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 COMMD10Q9Y6G5 202 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 CACNA1CQ13936 2221 aa11.03□□□□□ -0.64
VTI1A-208ENST00000494728 PDZD2O15018 2839 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 NSG1A0A0A6YYJ2 146 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF860A6NHJ4 632 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF839A8K0R7 811 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 SGK494L7N484 410 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 EIF3FO00303 357 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 LCMT2O60294 686 aaKnown RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 KLHL41O60662 606 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 BMP10O95393 424 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 HEXBP07686 556 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CDH1P12830 882 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 VARSP26640 1264 aaKnown RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 MEF2AQ02078 507 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CDC16Q13042 620 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 NAE1Q13564 534 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 FAM53BQ14153 422 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 C4orf17Q53FE4 359 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 KBTBD2Q8IY47 623 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 KCT2Q8NC54 265 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ST6GALNAC3Q8NDV1 305 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 GRK7Q8WTQ7 553 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ALKBH8Q96BT7 664 aaKnown RBP11.02□□□□□ -0.65
VTI1A-208ENST00000494728 TM4SF19Q96DZ7 209 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 MOCOSQ96EN8 888 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CFAP36Q96G28 342 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CAPZA3Q96KX2 299 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 OR4K3Q96R72 315 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 SLX1AQ9BQ83 275 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 TRIM51Q9BSJ1 452 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 SGPP1Q9BX95 441 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 VN1R1Q9GZP7 353 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF700Q9H0M5 742 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 EPS8L2Q9H6S3 715 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 MKL2Q9ULH7 1088 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
VTI1A-208ENST00000494728 KCNE1BA0A087WTH5 132 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 GOLGA6L10A0A0M3HER8 536 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 CES2O00748 559 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 DNAJB6O75190 326 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 RDH16O75452 317 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SEC24DO94855 1032 aaPredicted RBP11.01□□□□□ -0.65
VTI1A-208ENST00000494728 NSA2O95478 260 aaKnown RBP11.01□□□□□ -0.65
VTI1A-208ENST00000494728 B3GALT4O96024 378 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SERPINA7P05543 415 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 C8GP07360 202 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 ANXA5P08758 320 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 FDXRP22570 491 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 ELK3P41970 407 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TNFSF10P50591 281 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TDGF1P3P51864 188 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 RPS15AP62244 130 aaKnown RBP11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SP140Q13342 867 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF460Q14592 562 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 FASTKD3Q14CZ7 662 aaKnown RBP11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TLR1Q15399 786 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SPANXN3Q5MJ09 141 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 IRAK1BP1Q5VVH5 260 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TMEM207Q6UWW9 146 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SLC26A11Q86WA9 606 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF740Q8NDX6 193 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 OR5T3Q8NGG3 340 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 FAR1Q8WVX9 515 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 IMMP1LQ96LU5 166 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 PARVBQ9HBI1 364 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TMEM184CQ9NVA4 438 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 TAS2R13Q9NYV9 303 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 SLC5A6Q9Y289 635 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
VTI1A-208ENST00000494728 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
VTI1A-208ENST00000494728 C4orf51C9J302 202 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms