RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TOR1AIP1Q5JTV8 583 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 C22orf39Q6P5X5 142 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 NXPE1Q8N323 547 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TXNDC5Q8NBS9 432 aaKnown RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 OR6K6Q8NGW6 343 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 DNAJA4Q8WW22 397 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 KCNJ9Q92806 393 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 PNPLA2Q96AD5 504 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 COQ8BQ96D53 544 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 DZANK1Q9NVP4 752 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TRBC2A0A5B9 178 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 KLK3P07288 261 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TUBA1BP68363 451 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 ADAM17P78536 824 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF792Q3KQV3 632 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 COLEC12Q5KU26 742 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 TUBA1AQ71U36 451 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 FAM46DQ8NEK8 389 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 GFM1Q96RP9 751 aaKnown RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 RPF2Q9H7B2 306 aaKnown RBP18.6■□□□□ 0.57
COL27A1-207ENST00000494090 INSL5Q9Y5Q6 135 aa18.6■□□□□ 0.57
COL27A1-207ENST00000494090 NDUFS4O43181 175 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CPNE3O75131 537 aaKnown RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF8P17098 575 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SLC6A4P31645 630 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 TUBA3CQ13748 450 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 TREML1Q86YW5 311 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 GRPEL2Q8TAA5 225 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SMPDL3BQ92485 455 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 TFGQ92734 400 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SLC22A4Q9H015 551 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 RIMKLBQ9ULI2 386 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 PRAMEF33A0A0G2JMD5 474 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SCDO00767 359 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 PRAMEF10O60809 474 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 NOS1APO75052 506 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 APOC1P02654 83 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CHRM5P08912 532 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CCL5P13501 91 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 EIF5AP63241 154 aaKnown RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 TGFBIQ15582 683 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 Q6ZVU0 165 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 RASGRP3Q8IV61 690 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 ANKFN1Q8N957 763 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 OR8H1Q8NGG4 311 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SCAMP1O15126 338 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 LINGO3P0C6S8 592 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 OR2B6P58173 313 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CDK6Q00534 326 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SCRN3Q0VDG4 424 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 WDR45BQ5MNZ6 344 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 GALNTL5Q7Z4T8 443 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 KLHL6Q8WZ60 621 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SAMD11Q96NU1 681 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 KCNA7Q96RP8 456 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CD244Q9BZW8 370 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 PEX12O00623 359 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 KLK1P06870 262 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CYS1Q717R9 158 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 PCDHGB2Q9Y5G2 931 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 FKBP7Q9Y680 259 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SOD2P04179 222 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 RPS27LQ71UM5 84 aaKnown RBP18.59■□□□□ 0.57
COL27A1-207ENST00000494090 SLITRK4Q8IW52 837 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 DCUN1D3Q8IWE4 304 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 MNTQ99583 582 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 RNF121Q9H920 327 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 TM9SF3Q9HD45 589 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CTPS2Q9NRF8 586 aa18.59■□□□□ 0.57
COL27A1-207ENST00000494090 CPED1A4D0V7 1026 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 INPPL1O15357 1258 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 MTX2O75431 263 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 CNTN5O94779 1100 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 OPN1SWP03999 348 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 RPL19P84098 196 aaKnown RBP18.58■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF773Q6PK81 442 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF783Q6ZMS7 281 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 TMEM17Q86X19 198 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 OR2L3Q8NG85 312 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 OR5AK3PQ8NH89 298 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 PCYT2Q99447 389 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 TAC3Q9UHF0 121 aa18.58■□□□□ 0.57
COL27A1-207ENST00000494090 A0A0J9YVX5 310 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 OR14I1A6ND48 311 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 HTRA2O43464 458 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 ALDOAP04075 364 aaKnown RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 MAP3K8P41279 467 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 GDF5P43026 501 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 OR3A3P47888 321 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 OR3A2P47893 321 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 ZMYND11Q15326 602 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 SPANXN4Q5MJ08 99 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 IQCHQ86VS3 1027 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 WDTC1Q8N5D0 677 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF676Q8N7Q3 588 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 CPNE2Q96FN4 548 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 FCRL3Q96P31 734 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 SLC2A13Q96QE2 648 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 KXD1Q9BQD3 176 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms