RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 UGT2A3Q6UWM9 527 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 KIAA1324Q6UXG2 1013 aaKnown RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 Q7L0L9 218 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 CHST15Q7LFX5 561 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 METTL4Q8N3J2 472 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 C2orf73Q8N5S3 287 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 LINC01555Q8NAE3 123 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 TRPV3Q8NET8 790 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 OR52E4Q8NGH9 312 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SETD7Q8WTS6 366 aaKnown RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SMPDL3AQ92484 453 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 UBE2E3Q969T4 207 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SH3KBP1Q96B97 665 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 CXorf40BQ96DE9 158 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SIPA1Q96FS4 1042 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 PDXPQ96GD0 296 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 MRGPRX1Q96LB2 322 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 GBP5Q96PP8 586 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 OR2M4Q96R27 311 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-208ENST00000494028 CIB1Q99828 191 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SH3GL1Q99961 368 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 APOOQ9BUR5 198 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 BTBD1Q9H0C5 482 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 Q9H521 79 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 COQ10BQ9H8M1 238 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 ATP6V1HQ9UI12 483 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 ACSL5Q9ULC5 683 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 SUFUQ9UMX1 484 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 MAPRE3Q9UPY8 281 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 BTBD3Q9Y2F9 522 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 PLEKHM1Q9Y4G2 1056 aa10.24□□□□□ -0.77
CLCN6-208ENST00000494028 REV3LO60673 3130 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 ARHGAP10A1A4S6 786 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 PRSS38A1L453 326 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 C7orf72A4D263 438 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FAM149AA5PLN7 773 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 A6NHS1 94 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 C10orf142B7Z368 130 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 H3BQ06 376 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 CXCR6O00574 342 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FPGTO14772 594 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 YY2O15391 372 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 KLHL18O94889 574 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SEMA3DO95025 777 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SCELO95171 688 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 EPN2O95208 641 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TBX6O95947 436 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 C1QCP02747 245 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 MT-ND1P03886 318 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SMIM18P0DKX4 95 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 LAMP1P11279 417 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 CKMT2P17540 419 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 IL10P22301 178 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 RPL10P27635 214 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FOLH1Q04609 750 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SRSF11Q05519 484 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 NFATC4Q14934 902 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 HIST2H2ACQ16777 129 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TPRG1LQ5T0D9 272 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 C6orf52Q5T4I8 152 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 HIST2H2AA3Q6FI13 130 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TMEM92Q6UXU6 159 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 GCNT7Q6ZNI0 430 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SPRED1Q7Z699 444 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FAM124AQ86V42 546 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TRIM69Q86WT6 500 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 ZZZ3Q8IYH5 903 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 GALNT4Q8N4A0 578 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 PACRGLQ8N7B6 248 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 MFSD2AQ8NA29 543 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 ABHD11Q8NFV4 315 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TNIP2Q8NFZ5 429 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 RPLP0P6Q8NHW5 317 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 OR1E3Q8WZA6 343 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FIG4Q92562 907 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 PPWD1Q96BP3 646 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 FAM120BQ96EK7 910 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 REXO5Q96IC2 774 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 GUCD1Q96NT3 240 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SLC29A1Q99808 456 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 CENPKQ9BS16 269 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 TBCDQ9BTW9 1192 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 THUMPD3Q9BV44 507 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 DUSP26Q9BV47 211 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 ACAT2Q9BWD1 397 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 MS4A8Q9BY19 250 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 OR51B5Q9H339 312 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 GORASP2Q9H8Y8 452 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 IMP3Q9NV31 184 aaKnown RBP10.23□□□□□ -0.77
CLCN6-208ENST00000494028 BTNL2Q9UIR0 455 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 ICKQ9UPZ9 632 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 INVSQ9Y283 1065 aa10.23□□□□□ -0.77
CLCN6-208ENST00000494028 SZT2Q5T011 3432 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms