RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 OR1F2PQ96R84 312 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 CARD6Q9BX69 1037 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 FTHL17Q9BXU8 183 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 ZMYND12Q9H0C1 365 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 HOMER3Q9NSC5 361 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.14□□□□□ -1.75
GTF3A-208ENST00000493903 COX16Q9P0S2 106 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF624Q9P2J8 865 aaPredicted RBP4.14□□□□□ -1.75
GTF3A-208ENST00000493903 HPCAL4Q9UM19 191 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 SH3GLB1Q9Y371 365 aa4.14□□□□□ -1.75
GTF3A-208ENST00000493903 WDR33Q9C0J8 1336 aaKnown RBP4.14□□□□□ -1.75
GTF3A-208ENST00000493903 ARHGEF17Q96PE2 2063 aaPredicted RBP4.14□□□□□ -1.75
GTF3A-208ENST00000493903 KIF27Q86VH2 1401 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CFAP43Q8NDM7 1665 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PTPRMP28827 1452 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 MYH14Q7Z406 1995 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 A0A1W2PRB8 838 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SLC15A5A6NIM6 579 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 OR6C75A6NL08 312 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 C17orf105B2RV13 164 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 E9PI62 339 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 H0YCG3 227 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 MID1O15344 667 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 WDR1O75083 606 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SCGB2A1O75556 95 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SNX4O95219 450 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PAPSS2O95340 614 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 BAG3O95817 575 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SYF2O95926 243 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 LIPFP07098 398 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PRG2P13727 222 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 MYOD1P15172 320 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CKMT2P17540 419 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 FUT1P19526 365 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 JAK1P23458 1154 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PKLRP30613 574 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SSTR1P30872 391 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SSTR2P30874 369 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 AHRP35869 848 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 OR3A3P47888 321 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PTH2RP49190 550 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 NUMBP49757 651 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CCZ1BP86790 482 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CCZ1P86791 482 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF415Q09FC8 603 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 ZNF155Q12901 538 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TRAF2Q12933 501 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 ABRQ12979 859 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 DHX34Q14147 1143 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 GK2Q14410 553 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CALCRLQ16602 461 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 DUOXA1Q1HG43 343 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TDRD12Q587J7 1177 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 C8orf82Q6P1X6 216 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SIGLEC15Q6ZMC9 328 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 YTHDF3Q7Z739 585 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 RPAINQ86UA6 219 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 LGI2Q8N0V4 545 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 THEM5Q8N1Q8 247 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PRSS35Q8N3Z0 413 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TMEM199Q8N511 208 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 RBMXL3Q8N7X1 1067 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 ARHGAP45Q92619 1136 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 HAS2Q92819 552 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TANKQ92844 425 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TSACCQ96A04 125 aaPredicted RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 GUCD1Q96NT3 240 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 NECTIN4Q96NY8 510 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 CSF3RQ99062 836 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 MAP3K3Q99759 626 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 GPA33Q99795 319 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PRMT1Q99873 361 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 NTPCRQ9BSD7 190 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 TPPP3Q9BW30 176 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 NACAP1Q9BZK3 213 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 MTMR12Q9C0I1 747 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SLC39A8Q9C0K1 460 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 SMARCAL1Q9NZC9 954 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PLA2G4CQ9UP65 541 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 DMRT1Q9Y5R6 373 aa4.13□□□□□ -1.75
GTF3A-208ENST00000493903 DDX49Q9Y6V7 483 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PCF11O94913 1555 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 PDS5AQ29RF7 1337 aaKnown RBP4.13□□□□□ -1.75
GTF3A-208ENST00000493903 ARAP3Q8WWN8 1544 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 ABCA8O94911 1581 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 FRMPD1Q5SYB0 1578 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 M0R296 226 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 PSMD3O43242 534 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 NME2P1O60361 137 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 GRAP2O75791 330 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 PDE9AO76083 593 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 CLDN14O95500 239 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 RAF1P04049 648 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 DLATP10515 647 aaKnown RBP4.12□□□□□ -1.75
GTF3A-208ENST00000493903 ACP2P11117 423 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 DGKAP23743 735 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 ITGA3P26006 1051 aa4.12□□□□□ -1.75
GTF3A-208ENST00000493903 MARCKSP29966 332 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-208ENST00000493903 GNL1P36915 607 aaPredicted RBP4.12□□□□□ -1.75
GTF3A-208ENST00000493903 PITPNBP48739 271 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms