RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GPN3Q9UHW5 284 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 FARSAQ9Y285 508 aaKnown RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 ASB1Q9Y576 335 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 TK2O00142 265 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 GSTA1P08263 222 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 RAB40ALP0C0E4 278 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
CCM2-217ENST00000492883 TAC1P20366 129 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 GCGRP47871 477 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 CCT5P48643 541 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 REEP5Q00765 189 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 IRF8Q02556 426 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 SLBPQ14493 270 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCM2-217ENST00000492883 NKAIN1Q4KMZ8 207 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 GARNL3Q5VVW2 1013 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
CCM2-217ENST00000492883 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 KRT78Q8N1N4 520 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 METTL27Q8N6F8 245 aaPredicted RBP13.32□□□□□ -0.28
CCM2-217ENST00000492883 STARD8Q92502 1023 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 COL26A1Q96A83 441 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 CRELD1Q96HD1 420 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 MACROD1Q9BQ69 325 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 SARGQ9BW04 601 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 SPNS1Q9H2V7 528 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 PRM3Q9NNZ6 103 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 CDC14AQ9UNH5 594 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 MAU2Q9Y6X3 613 aa13.32□□□□□ -0.28
CCM2-217ENST00000492883 LRRC14BA6NHZ5 514 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 ZNF891A8MT65 544 aaPredicted RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 STX16O14662 325 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 P2RX6O15547 441 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 NDUFS4O43181 175 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 GLRA3O75311 464 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 CD63P08962 238 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 KRT4P19013 534 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PTPN4P29074 926 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 EEF1DP29692 281 aaKnown RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 AHRP35869 848 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 SCTRP47872 440 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 OR1D4P47884 311 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 MC1RQ01726 317 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 RGS1Q08116 209 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 CHIT1Q13231 466 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 LAPTM5Q13571 262 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PWP1Q13610 501 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 DOC2AQ14183 400 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCM2-217ENST00000492883 HIST2H2ACQ16777 129 aaPredicted RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 PAGE2BQ5JRK9 111 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 HIST2H2AA3Q6FI13 130 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PRMT9Q6P2P2 845 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 TMIGD1Q6UXZ0 262 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 GPR155Q7Z3F1 870 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 ENDOVQ8N8Q3 282 aaKnown RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 TM4SF19Q96DZ7 209 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 DRC3Q9H069 523 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 EHD1Q9H4M9 534 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PRORYQ9H606 182 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 GRID1Q9ULK0 1009 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
CCM2-217ENST00000492883 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
CCM2-217ENST00000492883 COPEO14579 308 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 NKX2-8O15522 239 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 CREG1O75629 220 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 MED26O95402 600 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 EPORP19235 508 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 CRHR1P34998 444 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 ARL1P40616 181 aaPredicted RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 AVPR1BP47901 424 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 PIK3CGP48736 1102 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 RPS18P62269 152 aaKnown RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 CYP4F2P78329 520 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 FAM53BQ14153 422 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 ERV3-1Q14264 604 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 NCF4Q15080 339 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 METTL2BQ6P1Q9 378 aaKnown RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 SH2D5Q6ZV89 423 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 MYLK4Q86YV6 388 aaPredicted RBP13.3□□□□□ -0.28
CCM2-217ENST00000492883 C4orf33Q8N1A6 199 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 DTWD1Q8N5C7 304 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 KCT2Q8NC54 265 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 TRPV3Q8NET8 790 aa13.3□□□□□ -0.28
CCM2-217ENST00000492883 TTLQ8NG68 377 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms