RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PAGE4O60829 102 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CNOT3O75175 753 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SLC43A1O75387 559 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 NOL4O94818 638 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 NADKO95544 446 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SERPINA5P05154 406 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 RPLP2P05387 115 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CSF1RP07333 972 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 GNAI3P08754 354 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ALPIP09923 528 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 COX7A2P14406 83 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CTPS1P17812 591 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PCMT1P22061 227 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 GLDCP23378 1020 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 EEF1B2P24534 225 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 KLRC1P26715 233 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TEAD1P28347 426 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PTPN7P35236 360 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PTGER4P35408 488 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 IGHMBP2P38935 993 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 P2RY2P41231 377 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PRCPP42785 496 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CAMPP49913 170 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 RAB9AP51151 201 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TAS2R60P59551 318 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PSME3P61289 254 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 AP1S1P61966 158 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ZFP36L1Q07352 338 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 DSC1Q08554 894 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ABHD18Q0P651 414 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 HYAL2Q12891 473 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ITGADQ13349 1161 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 BFSP2Q13515 415 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 NAE1Q13564 534 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TTLL4Q14679 1199 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SMCO1Q147U7 214 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TESK1Q15569 626 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 MAPK11Q15759 364 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 C18orf21Q32NC0 220 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PAQR3Q6TCH7 311 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CLEC18BQ6UXF7 455 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 NPSR1Q6W5P4 371 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SLC16A12Q6ZSM3 486 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM26Q6ZUK4 368 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ESPNLQ6ZVH7 1005 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PID1Q7Z2X4 250 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ERASQ7Z444 233 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 DPPA2Q7Z7J5 298 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SLCO6A1Q86UG4 719 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 RHOT1Q8IXI2 618 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ADGRG5Q8IZF4 528 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 LILRA2Q8N149 483 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 LRRC75A-AS1Q8N1F1 130 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CYP4Z2PQ8N1L4 340 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SYNE4Q8N205 404 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CPSF7Q8N684 471 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ATP6V0D2Q8N8Y2 350 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 DTWD2Q8NBA8 298 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SLC37A3Q8NCC5 494 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CLEC18CQ8NCF0 446 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 FBXL13Q8NEE6 735 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TBC1D16Q8TBP0 767 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 OSTF1Q92882 214 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 KLHL29Q96CT2 875 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 REPS1Q96D71 796 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 DGCR14Q96DF8 476 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 BSCL2Q96G97 398 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 C10orf90Q96M02 699 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 KLHL15Q96M94 604 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ZIM3Q96PE6 472 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 NPAS2Q99743 824 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CPPED1Q9BRF8 314 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM43Q9BTV4 400 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 MECRQ9BV79 373 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SCNM1Q9BWG6 230 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ROPN1BQ9BZX4 212 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 STRADBQ9C0K7 418 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 HRH4Q9H3N8 390 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 FZD8Q9H461 694 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 SRD5A3Q9H8P0 318 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 MEAF6Q9HAF1 191 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 APMAPQ9HDC9 416 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ABCB10Q9NRK6 738 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 RRP7BPQ9NSQ0 103 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 FAIMQ9NVQ4 179 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 GTSE1Q9NYZ3 720 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ADA2Q9NZK5 511 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 DLGAP2Q9P1A6 1054 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 CTTNBP2NLQ9P2B4 639 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 EIF3KQ9UBQ5 218 aaKnown RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PLAGL1Q9UM63 463 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 ABCG2Q9UNQ0 655 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 RASD1Q9Y272 281 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 UBE2J1Q9Y385 318 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-220ENST00000492859 GRIP1Q9Y3R0 1128 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 PTGDR2Q9Y5Y4 395 aa4.06□□□□□ -1.76
BRCA1-220ENST00000492859 MRPS18BQ9Y676 258 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms