RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 ABHD17BQ5VST6 288 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 DUPD1Q68J44 220 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 TMEM214Q6NUQ4 689 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 PAQR3Q6TCH7 311 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 LCTLQ6UWM7 567 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 ASPGQ86U10 573 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 ZC3H7AQ8IWR0 971 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 SLC34A3Q8N130 599 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 GPATCH11Q8N954 259 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CATSPER1Q8NEC5 780 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 OR51Q1Q8NH59 317 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 DNAJB8Q8NHS0 232 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 BRIX1Q8TDN6 353 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 SLC13A3Q8WWT9 602 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 TM4SF19Q96DZ7 209 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 IMMP1LQ96LU5 166 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CYTH2Q99418 400 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 PPANQ9NQ55 473 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 STMN3Q9NZ72 180 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 VWA7Q9Y334 891 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CSAG2Q9Y5P2 127 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 DOPEY2Q9Y3R5 2298 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 NAV2Q8IVL1 2488 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 NDC80O14777 642 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ENO2P09104 434 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 NPPBP16860 134 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 CCR8P51685 355 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 CSNK1G2P78368 415 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 NAE1Q13564 534 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 PWP1Q13610 501 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 MORF4L2Q15014 288 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 HERC3Q15034 1050 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 PCOLCEQ15113 449 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 EXT1Q16394 746 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 KCTD19Q17RG1 926 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 MINDY4Q4G0A6 757 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 MFSD4BQ5TF39 518 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 CPEB2Q7Z5Q1 589 aaKnown RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 PLD3Q8IV08 490 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ABHD11Q8NFV4 315 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 OR9A4Q8NGU2 314 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 CERS2Q96G23 380 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 PDLIM5Q96HC4 596 aaKnown RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 NDNQ99608 321 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 SLX1AQ9BQ83 275 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 SARGQ9BW04 601 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 SGPP1Q9BX95 441 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ATG10Q9H0Y0 220 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 CLK4Q9HAZ1 481 aaKnown RBP11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ARL15Q9NXU5 204 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ABI3Q9P2A4 366 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 ADAMTS6Q9UKP5 1117 aa11.79□□□□□ -0.52
COL6A1-205ENST00000492851 UTP20O75691 2785 aaKnown RBP11.78□□□□□ -0.52
COL6A1-205ENST00000492851 A1L4Q6 167 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 P2RX6O15547 441 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 LRRTM2O43300 516 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 JRKO75564 520 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 RASAL1O95294 804 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 STSP08842 583 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 XCR1P46094 333 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 MEF2AQ02078 507 aaPredicted RBP11.78□□□□□ -0.52
COL6A1-205ENST00000492851 FRG1Q14331 258 aaKnown RBP11.78□□□□□ -0.52
COL6A1-205ENST00000492851 BBS9Q3SYG4 887 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 PLAG1Q6DJT9 500 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 FAM45BPQ6NSW5 357 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 STRA8Q7Z7C7 330 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 SIRT6Q8N6T7 355 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 OR4K1Q8NGD4 311 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 FAM45AQ8TCE6 357 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 ANKRD7Q92527 254 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 ALKBH8Q96BT7 664 aaKnown RBP11.78□□□□□ -0.52
COL6A1-205ENST00000492851 LINGO1Q96FE5 620 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 SNF8Q96H20 258 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 OR1F2PQ96R84 312 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 VN1R1Q9GZP7 353 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 SYNPO2LQ9H987 977 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 PLA2G3Q9NZ20 509 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 OSGIN2Q9Y236 505 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 PCDHGB6Q9Y5F9 930 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 FER1L5A0AVI2 2057 aa11.78□□□□□ -0.52
COL6A1-205ENST00000492851 PCM1Q15154 2024 aa11.77□□□□□ -0.52
COL6A1-205ENST00000492851 RP1L1Q8IWN7 2480 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 SHANK1Q9Y566 2161 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 OR5H15A6NDH6 313 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 URADA6NGE7 173 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 A8MUI8 341 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 E2F3O00716 465 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 FFAR3O14843 346 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 GPR42O15529 346 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms