RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CYP4F3Q08477 520 aa21.13■□□□□ 0.97
PSPC1-204ENST00000492741 GALNTL6Q49A17 601 aa21.13■□□□□ 0.97
PSPC1-204ENST00000492741 ATP6AP1LQ52LC2 224 aa21.13■□□□□ 0.97
PSPC1-204ENST00000492741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.13■□□□□ 0.97
PSPC1-204ENST00000492741 GBP7Q8N8V2 638 aaPredicted RBP21.13■□□□□ 0.97
PSPC1-204ENST00000492741 TTLQ8NG68 377 aa21.13■□□□□ 0.97
PSPC1-204ENST00000492741 MAELQ96JY0 434 aaKnown RBP21.13■□□□□ 0.97
PSPC1-204ENST00000492741 SLC12A4Q9UP95 1085 aa21.13■□□□□ 0.97
PSPC1-204ENST00000492741 OR2A25A4D2G3 310 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 TLCD2A6NGC4 264 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 SLC9B1P1A6NJY1 282 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 KIF1CO43896 1103 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 SH3BP5O60239 455 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 SH3BGRLO75368 114 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CD59P13987 128 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 EZRP15311 586 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 ST6GAL1P15907 406 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RPS13P62277 151 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CCL7P80098 99 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CSTF3Q12996 717 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 XKR7Q5GH72 579 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 SNAP47Q5SQN1 464 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 FCRL6Q6DN72 434 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RNF165Q6ZSG1 346 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 Q6ZSR9 355 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 ALYREFQ86V81 257 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 ANKRD53Q8N9V6 530 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 OR2T11Q8NH01 316 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 BAHD1Q8TBE0 780 aaPredicted RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 ACTRT2Q8TDY3 377 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 TRAPPC9Q96Q05 1148 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CD180Q99467 661 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CCDC28BQ9BUN5 200 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 ACPTQ9BZG2 426 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 BRF2Q9HAW0 419 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 HCN4Q9Y3Q4 1203 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 FOXE1O00358 373 aaPredicted RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 MAP3K7O43318 606 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RRP9O43818 475 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 TGFB1P01137 390 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RPLP0P05388 317 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 HSD3B1P14060 373 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 NCF2P19878 526 aaPredicted RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 HSD3B2P26439 372 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 BCL6P41182 706 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 PIK3CBP42338 1070 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 SCTRP47872 440 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RPS15AP62244 130 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 CACHD1Q5VU97 1274 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 WDR74Q6RFH5 385 aaPredicted RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 LARP4Q71RC2 724 aaKnown RBP eCLIP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 NAXDQ8IW45 347 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 RHBGQ9H310 441 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 LRRN3Q9H3W5 708 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 GIMAP2Q9UG22 337 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 G3BP2Q9UN86 482 aaKnown RBP21.12■□□□□ 0.97
PSPC1-204ENST00000492741 TRIM33Q9UPN9 1127 aa21.12■□□□□ 0.97
PSPC1-204ENST00000492741 A0A0J9YVX5 310 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 SERTM1A2A2V5 107 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 PRAMEF10O60809 474 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 HOXB3P14651 431 aaPredicted RBP21.11■□□□□ 0.97
PSPC1-204ENST00000492741 LBPP18428 481 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 SERPINB1P30740 379 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 C19orf47Q8N9M1 422 aaKnown RBP21.11■□□□□ 0.97
PSPC1-204ENST00000492741 PPP3R2Q96LZ3 170 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 DMRT3Q9NQL9 472 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 NMRK1Q9NWW6 199 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 SOHLH2Q9NX45 425 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 VPS29Q9UBQ0 182 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 ZFP69BQ9UJL9 534 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 ATXN7L1Q9ULK2 861 aaPredicted RBP21.11■□□□□ 0.97
PSPC1-204ENST00000492741 TSC22D4Q9Y3Q8 395 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 KLK4Q9Y5K2 254 aa21.11■□□□□ 0.97
PSPC1-204ENST00000492741 FOXD2O60548 495 aaPredicted RBP21.1■□□□□ 0.97
PSPC1-204ENST00000492741 SEC22BO75396 215 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 CFHR1Q03591 330 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 ZIC1Q15915 447 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 AP5B1Q2VPB7 878 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 FBXO42Q6P3S6 717 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 FNDC5Q8NAU1 212 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 MFSD9Q8NBP5 474 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 STON2Q8WXE9 905 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 FCRL4Q96PJ5 515 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 ZFYVE21Q9BQ24 234 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 NUDT22Q9BRQ3 303 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 SARGQ9BW04 601 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 LRTM1Q9HBL6 345 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 PCDHGA4Q9Y5G9 962 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 CUL9Q8IWT3 2517 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 HEATR5BQ9P2D3 2071 aa21.1■□□□□ 0.97
PSPC1-204ENST00000492741 A8MU76 341 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 LSM1O15116 133 aaKnown RBP21.09■□□□□ 0.97
PSPC1-204ENST00000492741 CASC3O15234 703 aaKnown RBP21.09■□□□□ 0.97
PSPC1-204ENST00000492741 CTSVO60911 334 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 DCTN3O75935 186 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 CPNE6O95741 557 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 PTX3P26022 381 aaPredicted RBP21.09■□□□□ 0.97
PSPC1-204ENST00000492741 GSTM2P28161 218 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 CSF2RBP32927 897 aa21.09■□□□□ 0.97
PSPC1-204ENST00000492741 AHRP35869 848 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms