RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 MYOGP15173 224 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 PRLHRP49683 370 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 CASP9P55211 416 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 TPD52P55327 224 aaPredicted RBP12.41□□□□□ -0.42
PRAME-213ENST00000492657 HKDC1Q2TB90 917 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 CTU2Q2VPK5 515 aaKnown RBP12.41□□□□□ -0.42
PRAME-213ENST00000492657 CATSPEREQ5SY80 951 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 LEMD2Q8NC56 503 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ZNF420Q8TAQ5 688 aaPredicted RBP12.41□□□□□ -0.42
PRAME-213ENST00000492657 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 NRTNQ99748 197 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 POLE4Q9NR33 117 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 TBCCD1Q9NVR7 557 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 FBXO10Q9UK96 956 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 CDH7Q9ULB5 785 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 DOCK9Q9BZ29 2069 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 GABRR3A8MPY1 467 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 EVPLLA8MZ36 301 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 NPIPB8E9PQR5 432 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 hCG_2039718K7EN88 272 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 AXIN1O15169 862 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 KCNK5O95279 499 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 SOD1P00441 154 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ADH5P11766 374 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 MEF2AQ02078 507 aaPredicted RBP12.41□□□□□ -0.42
PRAME-213ENST00000492657 GTF2H3Q13889 308 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 THAP5Q7Z6K1 395 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 GALNT5Q7Z7M9 940 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ZDHHC21Q8IVQ6 265 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 OR52E4Q8NGH9 312 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 HUS1BQ8NHY5 278 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ZNF480Q8WV37 535 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ARRDC3Q96B67 414 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 ZNF707Q96C28 371 aaPredicted RBP12.41□□□□□ -0.42
PRAME-213ENST00000492657 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 AASSQ9UDR5 926 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 WDR37Q9Y2I8 494 aa12.41□□□□□ -0.42
PRAME-213ENST00000492657 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 MMP20O60882 483 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 AGXTP21549 392 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 RPS13P62277 151 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 FPGSQ05932 587 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 IER5LQ5T953 404 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 LAIR2Q6ISS4 152 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ERAP2Q6P179 960 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 CEP68Q76N32 757 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 R3HCC1LQ7Z5L2 792 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 PTOV1Q86YD1 416 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ADHFE1Q8IWW8 467 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ZZZ3Q8IYH5 903 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ZCCHC7Q8N3Z6 543 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 GLMNQ92990 594 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 RAD9AQ99638 391 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 TMEFF2Q9UIK5 374 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 PRKAB1Q9Y478 270 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ATG2BQ96BY7 2078 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 XIRP2A4UGR9 3374 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 H3BM21 787 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 FGF19O95750 216 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 NTRK1P04629 796 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 SRSF11Q05519 484 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 CD47Q08722 323 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 CSTF3Q12996 717 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 ZNF829Q3KNS6 432 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 GRHL2Q6ISB3 625 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 TRAPPC5Q8IUR0 188 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 SYTL1Q8IYJ3 562 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 C2orf73Q8N5S3 287 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 OR56A3Q8NH54 315 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 OR5K1Q8NHB7 308 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 BORCS5Q969J3 196 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 DOK1Q99704 481 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 RUVBL1Q9Y265 456 aaKnown RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 AP3M1Q9Y2T2 418 aa12.4□□□□□ -0.42
PRAME-213ENST00000492657 PCYT1BQ9Y5K3 369 aaPredicted RBP12.4□□□□□ -0.42
PRAME-213ENST00000492657 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 XYLBO75191 536 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 HPRP00739 348 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 TRPC1P48995 793 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 ST8SIA6P61647 398 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 STARD3Q14849 445 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 CRTC3Q6UUV7 619 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 DCP2Q8IU60 420 aaKnown RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 FAM9CQ8IZT9 166 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 EID3Q8N140 333 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 CHDHQ8NE62 594 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 PJA1Q8NG27 643 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms