RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PLA2G15Q8NCC3 412 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 SPPL3Q8TCT6 385 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 CSGALNACT1Q8TDX6 532 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 RBM4BQ9BQ04 359 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 RBM4Q9BWF3 364 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 C5AR2Q9P296 337 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 ATXN10Q9UBB4 475 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 J3QRK9 145 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 M0R129 80 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 SLC1A7O00341 560 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 RTCAO00442 366 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 SCAMP2O15127 329 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 LATO43561 262 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 ETFAP13804 333 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 PRPS1L1P21108 318 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 RPS6KA3P51812 740 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 PRSS53Q2L4Q9 553 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 FAM83HQ6ZRV2 1179 aaPredicted RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 DPPA4Q7L190 304 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 ARMCX6Q7L4S7 300 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF547Q8IVP9 402 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 SPARTQ8N0X7 666 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 NAGSQ8N159 534 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 OR5K1Q8NHB7 308 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 CCM2Q9BSQ5 444 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 TMEM184CQ9NVA4 438 aa12□□□□□ -0.49
HMGN1-220ENST00000492280 SPATA6Q9NWH7 488 aaPredicted RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 TUBA8Q9NY65 449 aaPredicted RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 TDRKHQ9Y2W6 561 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 SAMHD1Q9Y3Z3 626 aaKnown RBP12□□□□□ -0.49
HMGN1-220ENST00000492280 MGAT4DA6NG13 374 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 FGBP02675 491 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 C6P13671 934 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PTGER1P34995 402 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 CRATP43155 626 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PLA2G16P53816 162 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 ISL1P61371 349 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 MTAPQ13126 283 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 DGCR6Q14129 220 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 SMU1Q2TAY7 513 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PRSS36Q5K4E3 855 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 BROXQ5VW32 411 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 DUS1LQ6P1R4 473 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 FAM43BQ6ZT52 329 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PIWIL3Q7Z3Z3 882 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 ADGRD2Q7Z7M1 963 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 MMAAQ8IVH4 418 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 AADATQ8N5Z0 425 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 THAP11Q96EK4 314 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PNMA8BQ9ULN7 279 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 INSL6Q9Y581 213 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 A0A0J9YVX5 310 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 C6orf47O95873 294 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 DCKP27707 260 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 PSMB5P28074 263 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 KDELR2P33947 212 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 TGFBR1P36897 503 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 GPR1P46091 355 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 GJA8P48165 433 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 CLK3P49761 638 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 HTRA4P83105 476 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 AQP6Q13520 282 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 DCTN2Q13561 401 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 CPTPQ5TA50 214 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 GRHL2Q6ISB3 625 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 METTL2BQ6P1Q9 378 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 HORMAD1Q86X24 394 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 OR4A15Q8NGL6 344 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 SNRNP27Q8WVK2 155 aaKnown RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 AMBNQ9NP70 447 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 GPATCH2Q9NW75 528 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 FAF1Q9UNN5 650 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-220ENST00000492280 TESMINQ9Y4I5 508 aa11.99□□□□□ -0.49
HMGN1-220ENST00000492280 A0A0G2JN53 185 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 PRR23AA6NEV1 266 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 TOR1BO14657 336 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 CCNDBP1O95273 360 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 C1orf105O95561 183 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 EPHA5P54756 1037 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 DCDC1P59894 354 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ST8SIA6P61647 398 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 RPS26P62854 115 aaKnown RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 HBA1P69905 142 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 LIPJQ5W064 366 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 TTC23Q5W5X9 447 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 FAM109BQ6ICB4 259 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-220ENST00000492280 OR2T5Q6IEZ7 315 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 RNF165Q6ZSG1 346 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 COMMD6Q7Z4G1 85 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ATG16L2Q8NAA4 619 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 PJA1Q8NG27 643 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 OR5AR1Q8NGP9 310 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 OR2T29Q8NH02 315 aa11.98□□□□□ -0.49
HMGN1-220ENST00000492280 ADAMTS16Q8TE57 1224 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms