RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 LINC00032P0C843 101 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 ESRRAP11474 423 aaPredicted RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 IDO1P14902 403 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 XRCC1P18887 633 aaPredicted RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 CALB2P22676 271 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 MAPK1P28482 360 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 RBMS1P29558 406 aaKnown RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 ALDH4A1P30038 563 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 PRDX3P30048 256 aaKnown RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 SERPINB1P30740 379 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 CCKBRP32239 447 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 FASLGP48023 281 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 GABREP78334 506 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 ABATP80404 500 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 BNIP1Q12981 228 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SQSTM1Q13501 440 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 TUBB3Q13509 450 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SQLEQ14534 574 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 CLCA4Q14CN2 919 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 NAA25Q14CX7 972 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 CPSF6Q16630 551 aaKnown RBP eCLIP12.98□□□□□ -0.33
NUP188-208ENST00000491502 GRHL2Q6ISB3 625 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 OGFOD2Q6N063 350 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 IYDQ6PHW0 289 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 LARP4Q71RC2 724 aaKnown RBP eCLIP12.98□□□□□ -0.33
NUP188-208ENST00000491502 TRIM46Q7Z4K8 759 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SFTPA2Q8IWL1 248 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SFRP1Q8N474 314 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 SELENOMQ8WWX9 145 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 LCN9Q8WX39 176 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 METTL2AQ96IZ6 378 aaKnown RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 KCNA7Q96RP8 456 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 AKTIPQ9H8T0 292 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 PELI2Q9HAT8 420 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 TNFRSF12AQ9NP84 129 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 ZNF225Q9UK10 706 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 ZNF490Q9ULM2 529 aaPredicted RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 RAXQ9Y2V3 346 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 PCDHB11Q9Y5F2 797 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 PCDHGA8Q9Y5G5 932 aa12.98□□□□□ -0.33
NUP188-208ENST00000491502 CFAP20Q9Y6A4 193 aaKnown RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
NUP188-208ENST00000491502 PPM1DO15297 605 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 RRP8O43159 456 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 WFS1O76024 890 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 FKBP9O95302 570 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 CPNE6O95741 557 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 C1GALT1C1LP0DN25 315 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 THRAP10827 490 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 NPPBP16860 134 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 PKLRP30613 574 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 FOXA1P55317 472 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 OR1D5P58170 312 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 GPLD1P80108 840 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 ZFP36L1Q07352 338 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 CSTF3Q12996 717 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 DOC2AQ14183 400 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 GRB7Q14451 532 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 TBC1D25Q3MII6 688 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 XKR7Q5GH72 579 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 FRG2Q64ET8 278 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 MED27Q6P2C8 311 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 NXPE4Q6UWF7 544 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 LRRC69Q6ZNQ3 347 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 CHSY3Q70JA7 882 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 LRRC56Q8IYG6 542 aaPredicted RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 PATE1Q8WXA2 126 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 USP7Q93009 1102 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 WDR34Q96EX3 536 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 SLC46A1Q96NT5 459 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 FRG2BQ96QU4 278 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 SLC38A3Q99624 504 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 AIF1LQ9BQI0 150 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 CCDC106Q9BWC9 280 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUP188-208ENST00000491502 AKAP7Q9P0M2 348 aaPredicted RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 TAGLN3Q9UI15 199 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 SATB2Q9UPW6 733 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
NUP188-208ENST00000491502 BTRCQ9Y297 605 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 DMXL2Q8TDJ6 3036 aa12.97□□□□□ -0.33
NUP188-208ENST00000491502 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 A0A087WV48 116 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 A6NCN8 305 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 E7EQ34 232 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 FFAR3O14843 346 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 GPR42O15529 346 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 RSL1D1O76021 490 aaKnown RBP12.96□□□□□ -0.33
NUP188-208ENST00000491502 UNC5CO95185 931 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 EPORP19235 508 aa12.96□□□□□ -0.33
NUP188-208ENST00000491502 GRK3P35626 688 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms