RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 TRAPPC9Q96Q05 1148 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 SARGQ9BW04 601 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 KCNK13Q9HB14 408 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 KLHL3Q9UH77 587 aa20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 ATXN7L1Q9ULK2 861 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-204ENST00000491402 A0A0G2JND7 137 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 TRPC5OSA6NMA1 111 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SNX3O60493 162 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 PRAMEF10O60809 474 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 CPNE6O95741 557 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 PDYNP01213 254 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 PCNAP12004 261 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 EZRP15311 586 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 HOXD11P31277 338 aaPredicted RBP20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 INHBCP55103 352 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 RBBP5Q15291 538 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 ZIC1Q15915 447 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SGO1Q5FBB7 561 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SCIMPQ6UWF3 145 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 RNF165Q6ZSG1 346 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SPATA21Q7Z572 469 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 ANKRD53Q8N9V6 530 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 HUS1BQ8NHY5 278 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 MTERF1Q99551 399 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 NT5DC2Q9H857 520 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 MEAF6Q9HAF1 191 aa20.84■□□□□ 0.93
VCPKMT-204ENST00000491402 SLC9B1P1A6NJY1 282 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 OR1F1O43749 312 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 LCMT2O60294 686 aaKnown RBP20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 RASSF9O75901 435 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 KCNK5O95279 499 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 LINC00032P0C843 101 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 BCL6P41182 706 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 ACADVLP49748 655 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 C10orf62Q5T681 223 aaPredicted RBP20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 TMEM71Q6P5X7 295 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 TMPRSS9Q7Z410 1059 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 GLRX5Q86SX6 157 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 C19orf47Q8N9M1 422 aaKnown RBP20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 BCAS4Q8TDM0 211 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 C3orf30Q96M34 536 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 CCT7Q99832 543 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 SYNDIG1Q9H7V2 258 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 TOR4AQ9NXH8 423 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 DLL3Q9NYJ7 618 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 TSC22D4Q9Y3Q8 395 aa20.83■□□□□ 0.93
VCPKMT-204ENST00000491402 IGHV5-51A0A0C4DH38 117 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 CTSVO60911 334 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 SCTRP47872 440 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 SIM1P81133 766 aaPredicted RBP20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 DDX39BQ13838 428 aaKnown RBP20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 EPGNQ6UW88 154 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 PIGWQ7Z7B1 504 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 CARFQ8N187 725 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 RNF175Q8N4F7 328 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 TBC1D19Q8N5T2 526 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 EBF4Q9BQW3 602 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 DIAPH2O60879 1101 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 RPS15AP62244 130 aaKnown RBP20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 RELAQ04206 551 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 ZNF33BQ06732 778 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 CYP4F3Q08477 520 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 SLC9B1Q4ZJI4 515 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 XKR7Q5GH72 579 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 CACHD1Q5VU97 1274 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 TRIM46Q7Z4K8 759 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 VN1R5Q7Z5H4 357 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 SLCO6A1Q86UG4 719 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 C10orf82Q8WW14 230 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 CCT6BQ92526 530 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 FCRL4Q96PJ5 515 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 TMEM120AQ9BXJ8 343 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 RHBGQ9H310 441 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 PILRAQ9UKJ1 303 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 PCDHGA4Q9Y5G9 962 aa20.82■□□□□ 0.92
VCPKMT-204ENST00000491402 ATP6AP2A0A1C7CYW4 349 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 MAGEB17A8MXT2 336 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 NTN3O00634 580 aaPredicted RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 SDHDO14521 159 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 NDUFAB1O14561 156 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ATP6AP2O75787 350 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 EPHA3P29320 983 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 PIK3CBP42338 1070 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 IDH3AP50213 366 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 SNAP47Q5SQN1 464 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 FBXO42Q6P3S6 717 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ZNF574Q6ZN55 896 aaPredicted RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 RNF44Q7L0R7 432 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 PRSS42Q7Z5A4 293 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 TTLQ8NG68 377 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 OR4D9Q8NGE8 314 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 OR2T11Q8NH01 316 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ZNF473Q8WTR7 871 aaKnown RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 MAELQ96JY0 434 aaKnown RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 GFM1Q96RP9 751 aaKnown RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ZFYVE21Q9BQ24 234 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 ACPTQ9BZG2 426 aa20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 WDR55Q9H6Y2 383 aaPredicted RBP20.81■□□□□ 0.92
VCPKMT-204ENST00000491402 SYNPO2LQ9H987 977 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms