RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PYCR2Q96C36 320 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 THAP11Q96EK4 314 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PSMG3-AS1Q96PY0 264 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 OR4K3Q96R72 315 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 KRT12Q99456 494 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 WDR77Q9BQA1 342 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 ILKAPQ9H0C8 392 aaPredicted RBP17.07■□□□□ 0.32
HMGN1-219ENST00000491183 C14orf105Q9NVL8 296 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 MOCS1Q9NZB8 636 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 SNX24Q9Y343 169 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 PCDHGA10Q9Y5H3 936 aa17.07■□□□□ 0.32
HMGN1-219ENST00000491183 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 JRKO75564 520 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 BMP10O95393 424 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 HEXBP07686 556 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 CDH1P12830 882 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 CCND1P24385 295 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 GLRBP48167 497 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 MGAT5Q09328 741 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 CBLBQ13191 982 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 FHL5Q5TD97 284 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 TMEM214Q6NUQ4 689 aaKnown RBP17.06■□□□□ 0.32
HMGN1-219ENST00000491183 NDUFAF7Q7L592 441 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 KCT2Q8NC54 265 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 FBXO36Q8NEA4 188 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 PPP4R1Q8TF05 950 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 BARD1Q99728 777 aaKnown RBP17.06■□□□□ 0.32
HMGN1-219ENST00000491183 ARL15Q9NXU5 204 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 RNF14Q9UBS8 474 aa17.06■□□□□ 0.32
HMGN1-219ENST00000491183 COPG1Q9Y678 874 aaKnown RBP17.06■□□□□ 0.32
HMGN1-219ENST00000491183 RP1L1Q8IWN7 2480 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 LOC102723996A0A087X1L8 192 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 IGHV1-45A0A0A0MS14 117 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 NSG1A0A0A6YYJ2 146 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 BLACEA4D250 179 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 H0YIG0 161 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 SEMA7AO75326 666 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 NSA2O95478 260 aaKnown RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 CBX6O95503 412 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 CXCR2P25025 360 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 AVPR1BP47901 424 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 AP1S2P56377 157 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 EEF1A2Q05639 463 aaKnown RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 CAPN13Q6MZZ7 669 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 TMEM205Q6UW68 189 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 ISLR2Q6UXK2 745 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 LINC00696Q6ZRV3 163 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 SLC26A11Q86WA9 606 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 ZC3HC1Q86WB0 502 aaKnown RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 KBTBD2Q8IY47 623 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 CAMKVQ8NCB2 501 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 ABHD11Q8NFV4 315 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 OR4K1Q8NGD4 311 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 DNAJB14Q8TBM8 379 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 FBXL8Q96CD0 374 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 LMF1Q96S06 567 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 SLC29A3Q9BZD2 475 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
HMGN1-219ENST00000491183 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 USP9XQ93008 2570 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-219ENST00000491183 CNTRLQ7Z7A1 2325 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 LRRK2Q5S007 2527 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 GUCA1CO95843 209 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 CELA2AP08217 269 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 PRR35P0CG20 571 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 IL1RNP18510 177 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 SAT1P21673 171 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 MEF2AQ02078 507 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-219ENST00000491183 MFAP5Q13361 173 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 PCOLCEQ15113 449 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 NR6A1Q15406 480 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 SBSNQ6UWP8 590 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 STRA8Q7Z7C7 330 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 ASPGQ86U10 573 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 MFSD9Q8NBP5 474 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 CATSPER1Q8NEC5 780 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 SLC13A3Q8WWT9 602 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 HAUS8Q9BT25 410 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 ZNF700Q9H0M5 742 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 EPS8L2Q9H6S3 715 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 SMYD2Q9NRG4 433 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 ZFATQ9P243 1243 aa17.04■□□□□ 0.32
HMGN1-219ENST00000491183 OR2W5A6NFC9 320 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 SGK494L7N484 410 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 CDC7O00311 574 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PCDH17O14917 1159 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 PIAS1O75925 651 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 AGFG2O95081 481 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 SERPINA7P05543 415 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-219ENST00000491183 RNF224P0DH78 156 aa17.03■□□□□ 0.32
HMGN1-219ENST00000491183 ZNF37AP17032 561 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms