RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ICK	Q9UPZ9	632 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	PADI2	Q9Y2J8	665 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	MRPS23	Q9Y3D9	190 aa	Known RBP	6.13	□□□□□ -1.43
FN1-223	ENST00000490833	FAM32A	Q9Y421	112 aa	Known RBP	6.13	□□□□□ -1.43
FN1-223	ENST00000490833	PCDHGA2	Q9Y5H1	932 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	ACTL7A	Q9Y615	435 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	CEPT1	Q9Y6K0	416 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	PRSS21	Q9Y6M0	314 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	KIAA1671	Q9BY89	1806 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	GBF1	Q92538	1859 aa		6.13	□□□□□ -1.43
FN1-223	ENST00000490833	GNG14	A0A1W2PPG7	69 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ARRDC5	A6NEK1	342 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ANKDD1B	A6NHY2	528 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PLK4	O00444	970 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SCAMP3	O14828	347 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	FFAR3	O14843	346 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SCAMP2	O15127	329 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CCL16	O15467	120 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	GPR42	O15529	346 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SPINT1	O43278	529 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	BNIP3L	O60238	219 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	LZTS3	O60299	673 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	DFNA5	O60443	496 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TPST1	O60507	370 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PRKD3	O94806	890 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PRAMEF12	O95522	483 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CPNE6	O95741	557 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SERPINA1	P01009	418 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NTRK1	P04629	796 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MTHFD1	P11586	935 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF12	P17014	697 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SDC1	P18827	310 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CCNA2	P20248	432 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	LHCGR	P22888	699 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NDUFS1	P28331	727 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	IFNA8	P32881	189 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CTNNB1	P35222	781 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	GRK3	P35626	688 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	KRT20	P35900	424 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	GDF5	P43026	501 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	GPR1	P46091	355 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ALDH9A1	P49189	494 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PRIM2	P49643	509 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	DGKQ	P52824	942 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	OR4D2	P58180	307 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MTPN	P58546	118 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TUBA1B	P68363	451 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	HTRA3	P83110	453 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ZXDB	P98169	803 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PPP2R2B	Q00005	443 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	B4GALNT1	Q00973	533 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	HMGCS1	Q01581	520 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TGM3	Q08188	693 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NAE1	Q13564	534 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	KRR1	Q13601	381 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	DOC2A	Q14183	400 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PTGR1	Q14914	329 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TEAD2	Q15562	447 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MOG	Q16653	247 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TCTN1	Q2MV58	587 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	C11orf91	Q3C1V1	193 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF829	Q3KNS6	432 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	FBXO43	Q4G163	708 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TMEM35A	Q53FP2	167 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SGO1	Q5FBB7	561 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	C6orf141	Q5SZD1	244 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MLIP	Q5VWP3	458 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	DOK6	Q6PKX4	331 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TMEM220	Q6QAJ8	160 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SCIMP	Q6UWF3	145 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	LCTL	Q6UWM7	567 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MBOAT1	Q6ZNC8	495 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833		Q6ZVU0	165 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TUBA1A	Q71U36	451 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CCDC80	Q76M96	950 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TSPAN33	Q86UF1	283 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CYP4Z1	Q86W10	505 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	RALGPS2	Q86X27	583 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ZDHHC21	Q8IVQ6	265 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SYTL1	Q8IYJ3	562 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SAMD14	Q8IZD0	417 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	GJD3	Q8N144	294 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	VWA5B2	Q8N398	1253 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MINDY2	Q8NBR6	621 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	OR6K2	Q8NGY2	324 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SPPL3	Q8TCT6	385 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	WFDC5	Q8TCV5	224 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	HERVK_113	Q902F9	699 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SUSD6	Q92537	303 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MYDGF	Q969H8	173 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	WBP2	Q969T9	261 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MOAP1	Q96BY2	351 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NMD3	Q96D46	503 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NUS1	Q96E22	293 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	APOLD1	Q96LR9	279 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	COQ10A	Q96MF6	247 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833		Q96MT0	163 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TEFM	Q96QE5	360 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	P2RY13	Q9BPV8	354 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	AIF1L	Q9BQI0	150 aa		6.12	□□□□□ -1.43

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