RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 BCKDKO14874 412 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 STATHP02808 62 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 RPN2P04844 631 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CYC1P08574 325 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 PECAM1P16284 738 aaPredicted RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 ZFXP17010 805 aaPredicted RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CCR7P32248 378 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 ADRA1AP35348 466 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 XCR1P46094 333 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 PPIAP62937 165 aaKnown RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 HSPA14Q0VDF9 509 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 PTK6Q13882 451 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 PRSS41Q7RTY9 318 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 APTXQ7Z2E3 356 aaKnown RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CREB3L4Q8TEY5 395 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 RNASE6Q93091 150 aaKnown RBP12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 DEPPQ9NTK1 212 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 B4GALT7Q9UBV7 327 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 KIAA1549Q9HCM3 1950 aa12.79□□□□□ -0.36
EXOSC3-207ENST00000490516 ANK3Q12955 4377 aaKnown RBP12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 QSOX1O00391 747 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 VPS26AO75436 327 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 HRGP04196 525 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 BMP7P18075 431 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 AVPR1BP47901 424 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 ASCL1P50553 236 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 GEMP55040 296 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 KRTAP1-1Q07627 177 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 ABRAXAS2Q15018 415 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 NSDHLQ15738 373 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 C1orf185Q5T7R7 199 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 PRSS57Q6UWY2 283 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 TSLPQ969D9 159 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 OR2A5Q96R48 311 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 YIPF4Q9BSR8 244 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 ALKBH4Q9NXW9 302 aa12.78□□□□□ -0.36
EXOSC3-207ENST00000490516 OR14I1A6ND48 311 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 H7C0S8 307 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 OR1I1O60431 355 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 IFNA2P01563 188 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 BMP5P22003 454 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 CMPK1P30085 196 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 BDKRB1P46663 353 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 PLGLB1Q02325 96 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 FAM53BQ14153 422 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 PACS1Q6VY07 963 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 LKAAEAR1Q8TD35 194 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 PERPQ96FX8 193 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 C19orf43Q9BQ61 176 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 RBCK1Q9BYM8 510 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 VPS9D1Q9Y2B5 631 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.37
EXOSC3-207ENST00000490516 IGKV1-8A0A0C4DH67 115 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 OR51F1A6NGY5 319 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 H0YIG0 161 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 FCHO1O14526 889 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 WDR1O75083 606 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 GPC4O75487 556 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 CDC123O75794 336 aaPredicted RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 ANXA9O76027 345 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 NID1P14543 1247 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 OR4D2P58180 307 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 RHAGQ02094 409 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 ITIH4Q14624 930 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 TYSND1Q2T9J0 566 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 DENND5AQ6IQ26 1287 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 ULK2Q8IYT8 1036 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 NAXEQ8NCW5 288 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 KIAA1191Q96A73 305 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 RAD51AP1Q96B01 352 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 LRRC46Q96FV0 321 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 CDKN2AIPNLQ96HQ2 116 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 VAT1Q99536 393 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 PIP5K1AQ99755 562 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 GBA3Q9H227 469 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 NLE1Q9NVX2 485 aaPredicted RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 CTTNBP2NLQ9P2B4 639 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 ACAD8Q9UKU7 415 aa12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 RUVBL2Q9Y230 463 aaKnown RBP12.76□□□□□ -0.37
EXOSC3-207ENST00000490516 NFS1Q9Y697 457 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms