RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MAN2B2Q9Y2E5 1009 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 PTRH2Q9Y3E5 179 aaKnown RBP16.53■□□□□ 0.24
MDC1-206ENST00000489540 KCNMB2Q9Y691 235 aa16.53■□□□□ 0.24
MDC1-206ENST00000489540 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 SYCE1LA8MT33 242 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 TAPBPO15533 448 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 OR1F1O43749 312 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 H2AFYO75367 372 aaKnown RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 KLHL2O95198 593 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 MED26O95402 600 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 SNRPAP09012 282 aaKnown RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 GMPRP36959 345 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 GDF5P43026 501 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 POLE2P56282 527 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 SLC29A2Q14542 456 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 C18orf21Q32NC0 220 aaPredicted RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 ASPGQ86U10 573 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 RAB43Q86YS6 212 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 CENPLQ8N0S6 344 aaPredicted RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 ARHGEF39Q8N4T4 335 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 EXD3Q8N9H8 876 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 ADAMTS17Q8TE56 1095 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 NACC2Q96BF6 587 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 TSNARE1Q96NA8 513 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 ATOH8Q96SQ7 321 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 AIF1LQ9BQI0 150 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 CCDC77Q9BR77 488 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 VPS11Q9H270 941 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 DNAJC11Q9NVH1 559 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.23
MDC1-206ENST00000489540 MAU2Q9Y6X3 613 aa16.52■□□□□ 0.23
MDC1-206ENST00000489540 P2RX6O15547 441 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 FAM87AP0C7U9 286 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 C1GALT1C1LP0DN25 315 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 CXCR2P25025 360 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 MAGEA12P43365 314 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 IRF9Q00978 393 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 OCA2Q04671 838 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 CDC16Q13042 620 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 PWP1Q13610 501 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 LY6DQ14210 128 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 COX15Q7KZN9 410 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 TMPRSS11BQ86T26 416 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 APLFQ8IW19 511 aaPredicted RBP16.51■□□□□ 0.23
MDC1-206ENST00000489540 METTL27Q8N6F8 245 aaPredicted RBP16.51■□□□□ 0.23
MDC1-206ENST00000489540 TMEM79Q9BSE2 394 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 CD244Q9BZW8 370 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 DRC3Q9H069 523 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 ZNF282Q9UDV7 671 aaPredicted RBP16.51■□□□□ 0.23
MDC1-206ENST00000489540 FETUBQ9UGM5 382 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 TUBD1Q9UJT1 453 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 PCM1Q15154 2024 aa16.51■□□□□ 0.23
MDC1-206ENST00000489540 SUPT3HB4E1H0 165 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 CNOT3O75175 753 aaKnown RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 SUPT3HO75486 399 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 SLC35G6P0C7Q6 338 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 COL6A2P12110 1019 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 FBLP22087 321 aaKnown RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 AHRP35869 848 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 SCTRP47872 440 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 AVPR1BP47901 424 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 HSPA7P48741 367 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 REEP5Q00765 189 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 MEF2AQ02078 507 aaPredicted RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 DSG2Q14126 1118 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 NKG7Q16617 165 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 TMEM214Q6NUQ4 689 aaKnown RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 ADGRD1Q6QNK2 874 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 SLCO4C1Q6ZQN7 724 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 EXT2Q93063 718 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 MTBPQ96DY7 904 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 MMABQ96EY8 250 aaPredicted RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 GPR78Q96P69 363 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 PITHD1Q9GZP4 211 aaPredicted RBP16.5■□□□□ 0.23
MDC1-206ENST00000489540 ZFP69BQ9UJL9 534 aa16.5■□□□□ 0.23
MDC1-206ENST00000489540 VSTM2BA6NLU5 285 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 H0YIG0 161 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 MAP2K7O14733 419 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 CLGNO14967 610 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 FOXS1O43638 330 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 SLU7O95391 586 aaKnown RBP16.49■□□□□ 0.23
MDC1-206ENST00000489540 IGHEP01854 428 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 RBP1P09455 135 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 MYBL2P10244 700 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 OTX2P32243 289 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 KCNAB2Q13303 367 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 RBBP5Q15291 538 aaKnown RBP16.49■□□□□ 0.23
MDC1-206ENST00000489540 ATG9BQ674R7 924 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 TIFABQ6ZNK6 161 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 LRRC70Q7Z2Q7 622 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 GSPT2Q8IYD1 628 aaKnown RBP16.49■□□□□ 0.23
MDC1-206ENST00000489540 DTWD1Q8N5C7 304 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 SNX31Q8N9S9 440 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 ZNF740Q8NDX6 193 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 TRPV3Q8NET8 790 aa16.49■□□□□ 0.23
MDC1-206ENST00000489540 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms