RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 C12orf60Q5U649 245 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 RBMS3Q6XE24 437 aaKnown RBP4.53□□□□□ -1.68
CCL20-204ENST00000489160 PIGWQ7Z7B1 504 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 TRPT1Q86TN4 253 aaKnown RBP4.53□□□□□ -1.68
CCL20-204ENST00000489160 NR2C2APQ86WQ0 139 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 DCUN1D3Q8IWE4 304 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 BATF2Q8N1L9 274 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 KDM8Q8N371 416 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 DENND6BQ8NEG7 585 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 IPMKQ8NFU5 416 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 VANGL1Q8TAA9 524 aaPredicted RBP4.53□□□□□ -1.68
CCL20-204ENST00000489160 LRRC8CQ8TDW0 803 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 FCAMRQ8WWV6 532 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 AP2M1Q96CW1 435 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 CFAP36Q96G28 342 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 FAM20AQ96MK3 541 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 ZNF560Q96MR9 790 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 SPATA33Q96N06 139 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 NODALQ96S42 347 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 KCNK16Q96T55 309 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 PKP2Q99959 881 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 URM1Q9BTM9 101 aaKnown RBP4.53□□□□□ -1.68
CCL20-204ENST00000489160 PRRG4Q9BZD6 226 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 LSG1Q9H089 658 aaKnown RBP4.53□□□□□ -1.68
CCL20-204ENST00000489160 SRD5A3Q9H8P0 318 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 Q9H8V8 135 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 DNAJC4Q9NNZ3 241 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 DCAF16Q9NXF7 216 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 FLRT3Q9NZU0 649 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 TXNDC16Q9P2K2 825 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 EXOC7Q9UPT5 735 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 WDR83OSQ9Y284 106 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 CLCA3PQ9Y6N3 262 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 ATAD2BQ9ULI0 1458 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 NOTCH4Q99466 2003 aa4.53□□□□□ -1.68
CCL20-204ENST00000489160 UNC13AQ9UPW8 1703 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 NPHP3Q7Z494 1330 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 TRAV24A0A0B4J272 114 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 A0A1W2PPW3 197 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 KBTBD13C9JR72 458 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 MCF2LO15068 1137 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ARPC2O15144 300 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 SLC22A2O15244 555 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ZNF432O94892 652 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 LETM1O95202 739 aaPredicted RBP4.52□□□□□ -1.69
CCL20-204ENST00000489160 SERPING1P05155 500 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 SPP1P10451 314 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 CDH3P22223 829 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ANOS1P23352 680 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 AHCYP23526 432 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 CD27P26842 260 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ASMTP46597 345 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 IFNAR2P48551 515 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 MAZP56270 477 aaKnown RBP4.52□□□□□ -1.69
CCL20-204ENST00000489160 PTENP60484 403 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 KCNJ10P78508 379 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 PRKCEQ02156 737 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 TNK1Q13470 666 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 LGI2Q8N0V4 545 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ANKRD13CQ8N6S4 541 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 RASGEF1AQ8N9B8 481 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ZNF383Q8NA42 475 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 OR4K1Q8NGD4 311 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 OR52N5Q8NH56 324 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 PIGBQ92521 554 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 RAD54LQ92698 747 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 PROX1Q92786 737 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 BCL2L2Q92843 193 aaPredicted RBP4.52□□□□□ -1.69
CCL20-204ENST00000489160 RIT1Q92963 219 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 TMEM143Q96AN5 459 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 SNX25Q9H3E2 840 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 PPANQ9NQ55 473 aaKnown RBP4.52□□□□□ -1.69
CCL20-204ENST00000489160 DNAJC11Q9NVH1 559 aa4.52□□□□□ -1.69
CCL20-204ENST00000489160 ZNF624Q9P2J8 865 aaPredicted RBP4.52□□□□□ -1.69
CCL20-204ENST00000489160 A0A0A6YYC8 382 aaPredicted RBP4.51□□□□□ -1.69
CCL20-204ENST00000489160 A0A0G2JLW4 131 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 TRBV2A0A0J9YWF9 115 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 CASTOR2A6NHX0 329 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 ARHGAP42A6NI28 874 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 C2orf81A6NN90 581 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 FAM72CH0Y354 149 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 I3L1I5 382 aaPredicted RBP4.51□□□□□ -1.69
CCL20-204ENST00000489160 CTDSPLO15194 276 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 PPIP5K2O43314 1243 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 ABHD2P08910 425 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 IGHV4-31P0DP07 118 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 TCF4P15884 667 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 LBPP18428 481 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 ITGA3P26006 1051 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 SFNP31947 248 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 CEACAM8P31997 349 aaPredicted RBP4.51□□□□□ -1.69
CCL20-204ENST00000489160 TIMP3P35625 211 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 NPBWR1P48145 328 aa4.51□□□□□ -1.69
CCL20-204ENST00000489160 SERPINH1P50454 418 aaKnown RBP4.51□□□□□ -1.69
CCL20-204ENST00000489160 ADARP55265 1226 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms