RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ERP44Q9BS26 406 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 ILKAPQ9H0C8 392 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 PCBD2Q9H0N5 130 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CAB39LQ9H9S4 337 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 C5AR2Q9P296 337 aa13.3□□□□□ -0.28
VTI1A-206ENST00000489142 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-206ENST00000489142 PTPN13Q12923 2485 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 OR2W5A6NFC9 320 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 FAM187AA6NFU0 413 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 CYSRT1A8MQ03 144 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 SGK494L7N484 410 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 TXNDC9O14530 226 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 PRPF4O43172 522 aaKnown RBP eCLIP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 VPS4BO75351 444 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 COX6A1P12074 109 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 SOX8P57073 446 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 RELAQ04206 551 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 CALCOCO2Q13137 446 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MRPL49Q13405 166 aaKnown RBP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 TRADDQ15628 312 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 NDUFA9Q16795 377 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 C18orf21Q32NC0 220 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 CATSPEREQ5SY80 951 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MFSD4BQ5TF39 518 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 ATG9BQ674R7 924 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 LINC00696Q6ZRV3 163 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 ASPGQ86U10 573 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 SLC26A11Q86WA9 606 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 ZADH2Q8N4Q0 377 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 CISD2Q8N5K1 135 aaKnown RBP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 BBOF1Q8ND07 529 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 ZNF740Q8NDX6 193 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 OR56A3Q8NH54 315 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 PYROXD1Q8WU10 500 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 ANKRD49Q8WVL7 239 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 FBXL8Q96CD0 374 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MOCOSQ96EN8 888 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MVB12AQ96EY5 273 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 VPS39Q96JC1 886 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 RBCK1Q9BYM8 510 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 TRIM54Q9BYV2 358 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MKKSQ9NPJ1 570 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-206ENST00000489142 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 MKL2Q9ULH7 1088 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 VPS4AQ9UN37 437 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 B3GNT3Q9Y2A9 372 aa13.29□□□□□ -0.28
VTI1A-206ENST00000489142 CTAGE15A4D2H0 777 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 OR1F1O43749 312 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 RDH16O75452 317 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 B3GALT4O96024 378 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 HPP00738 406 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 SERPIND1P05546 499 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CCND1P24385 295 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 HRH2P25021 359 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 GMPRP36959 345 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 AVPR1BP47901 424 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 AP1S2P56377 157 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
VTI1A-206ENST00000489142 FAM53BQ14153 422 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 PPP1R3AQ16821 1122 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 AGAP7PQ5VUJ5 663 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 IRAK1BP1Q5VVH5 260 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 TMEM214Q6NUQ4 689 aaKnown RBP13.28□□□□□ -0.28
VTI1A-206ENST00000489142 IGFL3Q6UXB1 125 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CTAGE6Q86UF2 777 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CUZD1Q86UP6 607 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CCDC25Q86WR0 208 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 PDSS2Q86YH6 399 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 HPS6Q86YV9 775 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 SPATA6LQ8N4H0 392 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 SLC13A3Q8WWT9 602 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 NACC2Q96BF6 587 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 SNRNP40Q96DI7 357 aaKnown RBP13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CNDP1Q96KN2 507 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 AGAP4Q96P64 663 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 HAUS8Q9BT25 410 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 LHPPQ9H008 270 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 C14orf105Q9NVL8 296 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 ASF1BQ9NVP2 202 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 WHRNQ9P202 907 aa13.28□□□□□ -0.28
VTI1A-206ENST00000489142 MTO1Q9Y2Z2 717 aaKnown RBP13.28□□□□□ -0.28
VTI1A-206ENST00000489142 CPAMD8Q8IZJ3 1885 aa13.27□□□□□ -0.28
VTI1A-206ENST00000489142 KCNE1BA0A087WTH5 132 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NSG1A0A0A6YYJ2 146 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 IGHV3-20A0A0C4DH32 117 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NCF1BA6NI72 391 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NCF1CA8MVU1 366 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 TCP11X1B4DZS4 312 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 PHGDHO43175 533 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 NDUFS4O43181 175 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 IPO13O94829 963 aaKnown RBP13.27□□□□□ -0.29
VTI1A-206ENST00000489142 KLHL18O94889 574 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 BMP10O95393 424 aa13.27□□□□□ -0.29
VTI1A-206ENST00000489142 ENO2P09104 434 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms