RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 BEST3Q8N1M1 668 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 GCSAMQ8N6F7 178 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 ARL14EPQ8N8R7 260 aaPredicted RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 BMPERQ8N8U9 685 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 BBOF1Q8ND07 529 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 C17orf47Q8NEP4 570 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 OR4A16Q8NH70 328 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 PIGBQ92521 554 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 SYN2Q92777 582 aaPredicted RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 GGHQ92820 318 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 OSTF1Q92882 214 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 DAZAP1Q96EP5 407 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 SENP8Q96LD8 212 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 Q96MF0 132 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF778Q96MU6 729 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 ALG12Q9BV10 488 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CRNKL1Q9BZJ0 848 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 TM6SF1Q9BZW5 370 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CIPCQ9C0C6 399 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 RAB6CQ9H0N0 254 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CUEDC2Q9H467 287 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 DPEP3Q9H4B8 488 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CALHM2Q9HA72 323 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CYSLTR2Q9NS75 346 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 TRNAU1APQ9NX07 287 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CISD1Q9NZ45 108 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 THEGQ9P2T0 379 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CRLS1Q9UJA2 301 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 NOCTQ9UK39 431 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 AGO2Q9UKV8 859 aaKnown RBP3.21□□□□□ -1.9
PRPF4-203ENST00000488937 B3GALT5Q9Y2C3 310 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 TAF1P21675 1872 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 CUX2O14529 1486 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 RAD54L2Q9Y4B4 1467 aa3.21□□□□□ -1.9
PRPF4-203ENST00000488937 A0A075B6Q4 140 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TRAV24A0A0B4J272 114 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 LOC100653049A0A140TA62 436 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TCRBV5S1A1TA0A578 114 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 MAGEB16A2A368 324 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 HELTA6NFD8 242 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ACOD1A6NK06 481 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ASB14A6NK59 587 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 H3BMM5 538 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TMEM189-UBE2V1I3L0A0 370 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GRID2O43424 1007 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 DCXO43602 365 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GCATO75600 419 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 KRT34O76011 436 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 RGS11O94810 467 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NDUFB4O95168 129 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 STAMBPO95630 424 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NFATC1O95644 943 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GSRP00390 522 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NPPAP01160 153 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 IVLP07476 585 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 UGT1A1P22309 533 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 FCARP24071 287 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 CHMLP26374 656 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 OR1D2P34982 312 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 CETN2P41208 172 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 MAGEA11P43364 429 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TNFRSF4P43489 277 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NSFP46459 744 aaKnown RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ME1P48163 572 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 HSPA14Q0VDF9 509 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 UBE2V1Q13404 147 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 STIM1Q13586 685 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 HNRNPDQ14103 355 aaKnown RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 KPNB1Q14974 876 aaKnown RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ACKR1Q16570 336 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 SMTNL2Q2TAL5 461 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ARMC12Q5T9G4 340 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 FAM46CQ5VWP2 391 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 FRG2Q64ET8 278 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 PMF1Q6P1K2 205 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 LRRC8BQ6P9F7 803 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 VSTM1Q6UX27 236 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 SIGLEC15Q6ZMC9 328 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 Q6ZNX1 250 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TMPRSS11FQ6ZWK6 438 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 PTF1AQ7RTS3 328 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 TMCO2Q7Z6W1 182 aaPredicted RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 LUZP1Q86V48 1076 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 FAM228AQ86W67 206 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ZDHHC17Q8IUH5 632 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 RBFAQ8N0V3 343 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GCNT2Q8N0V5 402 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 LRRC75A-AS1Q8N1F1 130 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ITFG2Q969R8 447 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NCLNQ969V3 563 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GRAMD2BQ96HH9 432 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 MAGED4Q96JG8 741 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF48Q96MX3 618 aaPredicted RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF582Q96NG8 517 aaPredicted RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF570Q96NI8 536 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 NPY6RQ99463 290 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 GAL3ST1Q99999 423 aa3.2□□□□□ -1.9
PRPF4-203ENST00000488937 PAIP2Q9BPZ3 127 aaKnown RBP3.2□□□□□ -1.9
PRPF4-203ENST00000488937 BTBD10Q9BSF8 475 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms