RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 EPHA6Q9UF33 1036 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 FEZ2Q9UHY8 353 aaPredicted RBP5.7□□□□□ -1.5
CDHR3-213ENST00000488386 POMT2Q9UKY4 750 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 ASF1AQ9Y294 204 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 PPP2R2CQ9Y2T4 447 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 COLEC10Q9Y6Z7 277 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 FER1L5A0AVI2 2057 aa5.7□□□□□ -1.5
CDHR3-213ENST00000488386 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
CDHR3-213ENST00000488386 C17orf113A0A1B0GUU1 675 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 SLC5A10A0PJK1 596 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PIPSLA2A3N6 862 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 HEATR9A2RTY3 570 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 C9orf118A6NHY6 69 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 GOLGA8MH3BSY2 632 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 J3QKU1 62 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TOX3O15405 576 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PSMD3O43242 534 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PRICKLE3O43900 615 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 NRP2O60462 931 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TMEM63AO94886 807 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 FKBP9O95302 570 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ZBTB11O95625 1053 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ZNF888P0CJ79 500 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 UGT2B7P16662 529 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ADRA1DP25100 572 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ACADLP28330 430 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 NDUFS1P28331 727 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 STIP1P31948 543 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 NSG1P42857 185 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CCR10P46092 362 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 EIF3BP55884 814 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 IL2P60568 153 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TUBB4BP68371 445 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PRAMEP78395 509 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 HSD11B2P80365 405 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ACY1Q03154 408 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TOP3AQ13472 1001 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TUBB2AQ13885 445 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ITIH4Q14624 930 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 IL11RAQ14626 422 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 MYBPC3Q14896 1274 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CCNG2Q16589 344 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CCSMST1Q4G0I0 132 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 FASTKD1Q53R41 847 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ZNF789Q5FWF6 425 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 C1orf189Q5VU69 101 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 KLHL35Q6PF15 583 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CDHR3Q6ZTQ4 885 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 LINC00523Q86TU6 105 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 AMIGO1Q86WK6 493 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PRELID2Q8N945 189 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PPHLN1Q8NEY8 458 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 FLVCR1-AS1Q8TAF5 88 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 COG1Q8WTW3 980 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CLIP3Q96DZ5 547 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 LCORQ96JN0 433 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PPP1R2P1Q96PQ5 205 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TRAPPC9Q96Q05 1148 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 RANBP9Q96S59 729 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 FOXB1Q99853 325 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ZPBPQ9BS86 351 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TUBB2BQ9BVA1 445 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TWSG1Q9GZX9 223 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 SPRTNQ9H040 489 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 SLC25A18Q9H1K4 315 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 CHST8Q9H2A9 424 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 ACTL8Q9H568 366 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 STARD5Q9NSY2 213 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 GEMIN8Q9NWZ8 242 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 TRMT1Q9NXH9 659 aaKnown RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 SEMA5BQ9P283 1151 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 GALPQ9UBC7 116 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 PADI1Q9ULC6 663 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 HEMK1Q9Y5R4 338 aaPredicted RBP5.69□□□□□ -1.5
CDHR3-213ENST00000488386 NFS1Q9Y697 457 aa5.69□□□□□ -1.5
CDHR3-213ENST00000488386 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 BOD1L1Q8NFC6 3051 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ARGFXA6NJG6 315 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 USP27XA6NNY8 438 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ERI2A8K979 691 aaKnown RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CYSRT1A8MQ03 144 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ISM1B1AKI9 464 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 LIN7AO14910 233 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ZNF185O15231 689 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CD3EAPO15446 510 aaKnown RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 ZNF749O43361 778 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 NIPSNAP2O75323 286 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 BANF1O75531 89 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CREG1O75629 220 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 AP2A2O94973 939 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 VAPBO95292 243 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 GAS8O95995 478 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 KRT14P02533 472 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 FTH1P02794 183 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
CDHR3-213ENST00000488386 OR56A5P0C7T3 313 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 CBSLP0DN79 551 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 MCM3P25205 808 aa5.68□□□□□ -1.5
CDHR3-213ENST00000488386 PSMA3P25788 255 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms