RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 HAPLN1P10915 354 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 SKILP12757 684 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CDH3P22223 829 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 AZGP1P25311 298 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 MT3P25713 68 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CDC25CP30307 473 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 NPY4RP50391 375 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CCNHP51946 323 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CAPZA1P52907 286 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 MAT1AQ00266 395 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CDR2Q01850 454 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 SCN1BQ07699 218 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 C17orf67Q0P5P2 114 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 CA9Q16790 459 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 UGP2Q16851 508 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 BEND6Q5SZJ8 279 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 KLHL10Q6JEL2 608 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 C11orf88Q6PI97 169 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 PPP1R21Q6ZMI0 780 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 THAP8Q8NA92 274 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 PHLDA1Q8WV24 401 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 LZICQ8WZA0 190 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ARHGAP45Q92619 1136 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 MUS81Q96NY9 551 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 PRAM1Q96QH2 718 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 FEVQ99581 238 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 RAD9AQ99638 391 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 JPH2Q9BR39 696 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ST6GALNAC4Q9H4F1 302 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 SCRT2Q9NQ03 307 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 SDR39U1Q9NRG7 319 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 FGF21Q9NSA1 209 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 DDX19AQ9NUU7 478 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF701Q9NV72 531 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 DDX43Q9NXZ2 648 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 TBC1D7Q9P0N9 293 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 RASAL2Q9UJF2 1139 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 GTF3C4Q9UKN8 822 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 GAB2Q9UQC2 676 aa3.5□□□□□ -1.85
ECHDC1-217ENST00000488087 NPHP3Q7Z494 1330 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SYNJ2O15056 1496 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 ERCC6Q03468 1493 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 IGHV4-61A0A0C4DH41 118 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM64A6NGJ6 449 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM64BA6NI03 449 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CCDC69A6NI79 296 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 HHLA1C9JL84 531 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TRMUO75648 421 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SIX3O95343 332 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TGDSO95455 350 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CLPTM1O96005 669 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 PLGP00747 810 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 IGHV4-59P01825 116 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 HMBSP08397 361 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CD48P09326 243 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 FRMD6-AS1P0C7T7 363 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 PATE4P0C8F1 98 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MYL6BP14649 208 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 EZRP15311 586 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 FERP16591 822 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CYP11B2P19099 503 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CA6P23280 308 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 RPL21P46778 160 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 LHX1P48742 406 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 ALDH3A2P51648 485 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 BMXP51813 675 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 EVCP57679 992 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 PPARDQ03181 441 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CUL3Q13618 768 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CCDC57Q2TAC2 916 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TWISTNBQ3B726 338 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MCMDC2Q4G0Z9 681 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TCTE1Q5JU00 501 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 FFAR4Q5NUL3 377 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 C6orf136Q5SQH8 315 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CYP4A22Q5TCH4 519 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 HHATQ5VTY9 493 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM65Q6PJ69 517 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 DCLRE1AQ6PJP8 1040 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MOXD1Q6UVY6 613 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SLC16A9Q7RTY1 509 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SPATA21Q7Z572 469 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TLK2Q86UE8 772 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TIGD4Q8IY51 512 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 EID3Q8N140 333 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 OR8H3Q8N146 312 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 RYBPQ8N488 228 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MAPKAPK5-AS1Q8N8E1 139 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SPC24Q8NBT2 197 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 GOT1L1Q8NHS2 421 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 OLIG1Q8TAK6 271 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 C9orf43Q8TAL5 461 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM81AQ8TBF8 368 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 NR4A3Q92570 626 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 P3H4Q92791 437 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 PPP1R14BQ96C90 147 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 GIMAP5Q96F15 307 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 OTUB1Q96FW1 271 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms