RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FANCEQ9HB96 536 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 SLC6A20Q9NP91 592 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 RXFP3Q9NSD7 469 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 PNPOQ9NVS9 261 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF225Q9UK10 706 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF490Q9ULM2 529 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TRIM33Q9UPN9 1127 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 PLCL2Q9UPR0 1127 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 BTRCQ9Y297 605 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TMED5Q9Y3A6 229 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 AP1M2Q9Y6Q5 423 aa10.59□□□□□ -0.71
HDLBP-242ENST00000488013 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 FANCMQ8IYD8 2048 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 A0A088AWK7 358 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 IGKV1-8A0A0C4DH67 115 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 D6RAR5 112 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 RSL1D1O76021 490 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SEMA3DO95025 777 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SERPINA6P08185 405 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SLC35G6P0C7Q6 338 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 KITP10721 976 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ACPPP15309 386 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ZNF10P21506 573 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 DRD4P21917 467 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CCR10P46092 362 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SEC24CP53992 1094 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 AQP5P55064 265 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 STXBP1P61764 594 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CCL7P80098 99 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ACY1Q03154 408 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 MAD2L1Q13257 205 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CUL3Q13618 768 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 TRIP6Q15654 476 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 IMPG1Q17R60 797 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 PERM1Q5SV97 790 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CLEC6AQ6EIG7 209 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 RBM44Q6ZP01 1051 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 FAM92BQ6ZTR7 304 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 RPS27LQ71UM5 84 aaKnown RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 RNF44Q7L0R7 432 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ASCL5Q7RTU5 278 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SPATA21Q7Z572 469 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CACTIN-AS1Q8N1I8 211 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 D2HGDHQ8N465 521 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 DCBLD1Q8N8Z6 715 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 OR8K5Q8NH50 307 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CEP70Q8NHQ1 597 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 HUS1BQ8NHY5 278 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 WDR20Q8TBZ3 569 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 AGR3Q8TD06 166 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ACTRT2Q8TDY3 377 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 N4BP2L2Q92802 583 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 MOCOSQ96EN8 888 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SLC41A2Q96JW4 573 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 QRFPRQ96P65 431 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 MAP3K3Q99759 626 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CCDC28BQ9BUN5 200 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ROGDIQ9GZN7 287 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ACSS2Q9NR19 701 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 ENAMQ9NRM1 1142 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 CUEDC1Q9NWM3 386 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 VPS29Q9UBQ0 182 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 MARCOQ9UEW3 520 aaPredicted RBP10.58□□□□□ -0.72
HDLBP-242ENST00000488013 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
HDLBP-242ENST00000488013 A0A1W2PQM1 296 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 NDUFAB1O14561 156 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 FFAR3O14843 346 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 GPR42O15529 346 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 SNX3O60493 162 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 GFRA3O60609 400 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 PRAMEF4O60810 478 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 DIAPH2O60879 1101 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 MYO1DO94832 1006 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 THRAP10827 490 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 PCNAP12004 261 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 MYF5P13349 255 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 CEACAM1P13688 526 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 NELFEP18615 380 aaKnown RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 CD22P20273 847 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 PRPH2P23942 346 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 MAPK1P28482 360 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 CCKBRP32239 447 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 CSF2RBP32927 897 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 CSTF2P33240 577 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 TSFMP43897 325 aaKnown RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 ARFIP2P53365 341 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 GFERP55789 205 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 EIF3IQ13347 325 aaKnown RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 PDCD2Q16342 344 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 SPIN4Q56A73 249 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 YOD1Q5VVQ6 348 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-242ENST00000488013 PRAMEF9Q5VWM5 478 aa10.57□□□□□ -0.72
HDLBP-242ENST00000488013 FBXO42Q6P3S6 717 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms