RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DNAJB6O75190 326 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 PDE9AO76083 593 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 NDST3O95803 873 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 FTLP02792 175 aaPredicted RBP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 CYP1A2P05177 515 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 CYC1P08574 325 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 FAM157CP0CG43 387 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 TCF4P15884 667 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MX2P20592 715 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 ACADLP28330 430 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 RFC3P40938 356 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 EMP3P54852 163 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 VSX2P58304 361 aaPredicted RBP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MUM1Q2TAK8 710 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 RIPPLY2Q5TAB7 128 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 FIGLAQ6QHK4 219 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 CPEB2Q7Z5Q1 589 aaKnown RBP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 ZC3H7AQ8IWR0 971 aaKnown RBP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 SULF2Q8IWU5 870 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 IFT20Q8IY31 132 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 TBC1D21Q8IYX1 336 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MREGQ8N565 214 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 SLC5A8Q8N695 610 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 LINC01555Q8NAE3 123 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 M1APQ8TC57 530 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 ZNF398Q8TD17 642 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 LRRN4Q8WUT4 740 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 ROBO4Q8WZ75 1007 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 SMPDL3BQ92485 455 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MVB12AQ96EY5 273 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 ZFYVE21Q9BQ24 234 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRIM56-204ENST00000487252 PARVAQ9NVD7 372 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 PSD3Q9NYI0 1048 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 POLG2Q9UHN1 485 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 NPFFR2Q9Y5X5 522 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
TRIM56-204ENST00000487252 MIF4GDA9UHW6 222 aaKnown RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 FAM47E-STBD1D6RA91 191 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 BCKDKO14874 412 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 CEP104O60308 925 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 TRHRP34981 398 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 CHRNA4P43681 627 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 IFI35P80217 286 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 ZBTB17Q13105 803 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 EXT1Q16394 746 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 PRTGQ2VWP7 1150 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 CHRFAM7AQ494W8 412 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 KIAA0930Q6ICG6 404 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 FRMPD2BQ6IN97 320 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 OR5M9Q8NGP3 310 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 OR5K2Q8NHB8 316 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 CREB3L4Q8TEY5 395 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 KRT12Q99456 494 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 PLCD4Q9BRC7 762 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 ZDHHC11Q9H8X9 412 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 STOX2Q9P2F5 926 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 KLF13Q9Y2Y9 288 aaPredicted RBP10.94□□□□□ -0.66
TRIM56-204ENST00000487252 KLK4Q9Y5K2 254 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 CR1P17927 2039 aa10.94□□□□□ -0.66
TRIM56-204ENST00000487252 LOC105369274A0A096LPK9 316 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 LOC102723532A0A0G2JNH3 316 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 TMCO5BA8MYB1 307 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 TARM1B6A8C7 271 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 KLRC4-KLRK1H3BQV0 150 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 POLR3GO15318 223 aaPredicted RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 PRPF4O43172 522 aaKnown RBP eCLIP10.93□□□□□ -0.662e-9■■□□□ 13.2
TRIM56-204ENST00000487252 SYF2O95926 243 aaKnown RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 RARAP10276 462 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 THBS2P35442 1172 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 TNNT3P45378 269 aaPredicted RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 CYB561P49447 251 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 SORDQ00796 357 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 PCSK7Q16549 785 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 POMZP3Q6PJE2 187 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 PAOXQ6QHF9 649 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 LANCL3Q6ZV70 420 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 GSPT2Q8IYD1 628 aaKnown RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 OR4N4Q8N0Y3 316 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 ARHGEF39Q8N4T4 335 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 LINC01560Q8TB33 94 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 HSPH1Q92598 858 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 ZUFSPQ96AP4 578 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 LRRC46Q96FV0 321 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 PERPQ96FX8 193 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 CYTH2Q99418 400 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 VN1R1Q9GZP7 353 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 INTS7Q9NVH2 962 aaKnown RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 CDC14AQ9UNH5 594 aa10.93□□□□□ -0.66
TRIM56-204ENST00000487252 RAI1Q7Z5J4 1906 aaPredicted RBP10.93□□□□□ -0.66
TRIM56-204ENST00000487252 A0A1B0GVC2 190 aa10.92□□□□□ -0.66
TRIM56-204ENST00000487252 KCNK1O00180 336 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms