RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NPIPA5E9PKD4 350 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 MAN1A2O60476 641 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 VAPBO95292 243 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 NSA2O95478 260 aaKnown RBP18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 MLYCDO95822 493 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 EEF1DP29692 281 aaKnown RBP18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 RPL22P35268 128 aaKnown RBP18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CD96P40200 585 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 TAP2Q03519 686 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 MEP1AQ16819 746 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 SPINK14Q6IE38 97 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CES3Q6UWW8 571 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 ANKRD37Q7Z713 158 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 SDCCAG8Q86SQ7 713 aaPredicted RBP18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CEP97Q8IW35 865 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 OR51Q1Q8NH59 317 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 UTP23Q9BRU9 249 aaKnown RBP18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 GPAMQ9HCL2 828 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 HCN3Q9P1Z3 774 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 NPIPA1Q9UND3 350 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CRYL1Q9Y2S2 319 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CCDC168Q8NDH2 2452 aa18.35■□□□□ 0.53
SMPDL3A-202ENST00000487215 CD46P15529 392 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 CAPN3P20807 821 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 XCR1P46094 333 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 ADARP55265 1226 aaKnown RBP18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 PTK6Q13882 451 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 VN1R4Q7Z5H5 301 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 CDH24Q86UP0 819 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 SLC13A5Q86YT5 568 aaPredicted RBP18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 SIAH3Q8IW03 269 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 LRRC56Q8IYG6 542 aaPredicted RBP18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 SPOCK3Q9BQ16 436 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 KIFC1Q9BW19 673 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 SYBUQ9NX95 663 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 BFARQ9NZS9 450 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 CAPN6Q9Y6Q1 641 aa18.34■□□□□ 0.53
SMPDL3A-202ENST00000487215 H7BY64 318 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 ZNHIT1O43257 154 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 IL1RNP18510 177 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 MGAT1P26572 445 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 NPY2RP49146 381 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 AGTR2P50052 363 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 EXT1Q16394 746 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 SPNS3Q6ZMD2 512 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 SPNS2Q8IVW8 549 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 TMEM178AQ8NBL3 297 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 FBXO15Q8NCQ5 510 aaPredicted RBP18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 M1APQ8TC57 530 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 AGAP11Q8TF27 550 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 PRAP1Q96NZ9 151 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 TCF12Q99081 682 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 SLC30A3Q99726 388 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 EBNA1BP2Q99848 306 aaKnown RBP18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 MACROD1Q9BQ69 325 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 MMP25Q9NPA2 562 aa18.33■□□□□ 0.52
SMPDL3A-202ENST00000487215 GABRR3A8MPY1 467 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 E5RI56 91 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 SGK494L7N484 410 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 PFDN6O15212 129 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 ASNA1O43681 348 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 SYF2O95926 243 aaKnown RBP18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 ABOP16442 354 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 BCL6P41182 706 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 CLCN7P51798 805 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 BASP1P80723 227 aaKnown RBP18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 HSF1Q00613 529 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 TLE4Q04727 773 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 THEMIS2Q5TEJ8 643 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 GALNTL5Q7Z4T8 443 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 CHERPQ8IWX8 916 aaKnown RBP18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 ACBD4Q8NC06 268 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 GIMAP7Q8NHV1 300 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 MCOLN3Q8TDD5 553 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 PHF10Q8WUB8 498 aaKnown RBP18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 CHTF18Q8WVB6 975 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 TRIM51Q9BSJ1 452 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 ENKD1Q9H0I2 346 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 DRG1Q9Y295 367 aaKnown RBP18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 HEATR5BQ9P2D3 2071 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 PCNX1Q96RV3 2341 aa18.32■□□□□ 0.52
SMPDL3A-202ENST00000487215 AP3B1O00203 1094 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 NEURL1O76050 574 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 OGNP20774 298 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 OC90Q02509 493 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 TMEM214Q6NUQ4 689 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 PAPD4Q6PIY7 484 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 CENPUQ71F23 418 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 DOLPP1Q86YN1 238 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 GHDCQ8N2G8 530 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 SLC5A8Q8N695 610 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 FAM98AQ8NCA5 519 aaKnown RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 BAG1Q99933 345 aaPredicted RBP18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 MCCC2Q9HCC0 563 aa18.31■□□□□ 0.52
SMPDL3A-202ENST00000487215 TMEM184CQ9NVA4 438 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms