RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 CLDN2P57739 230 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 POLR2LP62875 67 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 RPS21P63220 83 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 MSLNQ13421 630 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 OLIG2Q13516 323 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 RPS6KA2Q15349 733 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 CDKN3Q16667 212 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 WDR45BQ5MNZ6 344 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 TTC27Q6P3X3 843 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 RFLNAQ6ZTI6 216 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 USP51Q70EK9 711 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 TSPAN33Q86UF1 283 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 CDKL3Q8IVW4 592 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 ACTRT1Q8TDG2 376 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 C3orf49Q96BT1 292 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 CENPTQ96BT3 561 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 CTHRC1Q96CG8 243 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 RTP4Q96DX8 246 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 BMFQ96LC9 184 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 SPATA13Q96N96 652 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 MCCC1Q96RQ3 725 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 KLF6Q99612 283 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 WRAP53Q9BUR4 548 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 MLPHQ9BV36 600 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 SEPSECSQ9HD40 501 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 TM9SF3Q9HD45 589 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 FZD3Q9NPG1 666 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 MBNL1Q9NR56 388 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 SERTAD4Q9NUC0 356 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 MGAT4CQ9UBM8 478 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM153AQ9UHL3 310 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 ZNF148Q9UQR1 794 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 PCDHGA5Q9Y5G8 931 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 PTPRQQ9UMZ3 2332 aa6.1□□□□□ -1.43
RTFDC1-209ENST00000487211 SPAG17Q6Q759 2223 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 A0A1B0GVT2 93 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 A0A1W2PQ67 120 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CCDC151A5D8V7 595 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A18PA6NE21 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A16PA6NEW6 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A9PA6NNJ1 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 LINC00473A8K010 186 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A5PA8MXJ8 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 EIF3FO00303 357 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 QSOX1O00391 747 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 TM7SF2O76062 418 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 RECQL5O94762 991 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 HEXIM1O94992 359 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CLDN7O95471 211 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 EPOP01588 193 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A15PP0C7V4 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FAM90A14PP0C7W9 464 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PIRTP0C851 137 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 C6P13671 934 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ADRA1DP25100 572 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 MSNP26038 577 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PSMB4P28070 264 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 RPL22P35268 128 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ADRA1AP35348 466 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 COILP38432 576 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 MMP12P39900 470 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 SUOXP51687 545 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 RIPPLY3P57055 190 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CDK18Q07002 472 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ELP6Q0PNE2 266 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 FOXI1Q12951 378 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 SGCGQ13326 291 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 GALNT3Q14435 633 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CNGA3Q16281 694 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 DUOXA1Q1HG43 343 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PARP6Q2NL67 630 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 WSCD2Q2TBF2 565 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 TBC1D25Q3MII6 688 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 AASDHQ4L235 1098 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CFAP58Q5T655 872 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 KCTD11Q693B1 232 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 KIAA1161Q6NSJ0 714 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 RANBP10Q6VN20 620 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 SYT10Q6XYQ8 523 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PTCHD4Q6ZW05 846 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 DPPA4Q7L190 304 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 HSD11B1LQ7Z5J1 315 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 WDR53Q7Z5U6 358 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 TECPR1Q7Z6L1 1165 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 TRABD2AQ86V40 505 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 KLHDC8BQ8IXV7 354 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PELI3Q8N2H9 469 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ZCCHC9Q8N567 271 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 LPCAT1Q8NF37 534 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ABHD11Q8NFV4 315 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 CXorf40AQ8TE69 158 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 ASB12Q8WXK4 309 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 MAGOHBQ96A72 148 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 SERAC1Q96JX3 654 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 LENG8Q96PV6 779 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 LYSMD1Q96S90 227 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 NAPGQ99747 312 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms