RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MARVELD2Q8N4S9 558 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 KIAA0895Q8NCT3 520 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 OR7A2PQ8NGA2 310 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 HPSE2Q8WWQ2 592 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 TSSK2Q96PF2 358 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 NDNQ99608 321 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 RAB9BQ9NP90 201 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 IARS2Q9NSE4 1012 aaKnown RBP4.09□□□□□ -1.75
SMC4-218ENST00000486711 GPR132Q9UNW8 380 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 MMP24Q9Y5R2 645 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 STK36Q9NRP7 1315 aa4.09□□□□□ -1.75
SMC4-218ENST00000486711 A0A1W2PRV1 198 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 PMS2P5A8MQ11 134 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 C2CD4DB7Z1M9 353 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 BLOC1S5-TXNDC5H3BN57 136 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 EXTL3O43909 919 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 GLCEO94923 617 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CFC1BP0CG36 223 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CFC1P0CG37 223 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 UROSP10746 265 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 LBX1P52954 281 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CETN1Q12798 172 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 SGCGQ13326 291 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 KRT71Q3SY84 523 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 XKR6Q5GH73 641 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 SLC25A53Q5H9E4 307 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 FGD3Q5JSP0 725 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 SLC10A5Q5PT55 438 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 PODNL1Q6PEZ8 512 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 PRSS55Q6UWB4 352 aaPredicted RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 ANKRD33Q7Z3H0 272 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CCDC83Q8IWF9 413 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 WDSUB1Q8N9V3 476 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 GPRC5AQ8NFJ5 357 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 OR4C15Q8NGM1 316 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 PIK3R3Q92569 461 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 SNRNP40Q96DI7 357 aaKnown RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 SENP5Q96HI0 755 aaPredicted RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 CDKN2AIPNLQ96HQ2 116 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CDCA3Q99618 268 aaPredicted RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 C17orf62Q9BQA9 187 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 IDI2Q9BXS1 227 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 CACNG6Q9BXT2 260 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 SHARPINQ9H0F6 387 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 UBQLN3Q9H347 655 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 C10orf88Q9H8K7 445 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 RPF1Q9H9Y2 349 aaKnown RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 RNPEPL1Q9HAU8 725 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 PHPT1Q9NRX4 125 aaPredicted RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 INTS10Q9NVR2 710 aaKnown RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 IL36AQ9UHA7 158 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 NOCTQ9UK39 431 aaKnown RBP4.08□□□□□ -1.76
SMC4-218ENST00000486711 STX8Q9UNK0 236 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 TCF19Q9Y242 345 aa4.08□□□□□ -1.76
SMC4-218ENST00000486711 A0A0B4J203 849 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 E5RGE8 158 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 FPGTO14772 594 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 TTI1O43156 1089 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 EDIL3O43854 480 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ZG16O60844 167 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ATP9AO75110 1047 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 RTN2O75298 545 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 TRMUO75648 421 aaKnown RBP4.07□□□□□ -1.76
SMC4-218ENST00000486711 BAG3O95817 575 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 EML2O95834 649 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ATP1B1P05026 303 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 HMBSP08397 361 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 F3P13726 295 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 HLA-DPA1P20036 260 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ALDH1B1P30837 517 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 KHKP50053 298 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 CLDN17P56750 224 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 PPP2R5CQ13362 524 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 TRIM29Q14134 588 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 GPR33Q49SQ1 333 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 TMEM270Q6UE05 265 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 PRUNE1Q86TP1 453 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 ZNF843Q8N446 348 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 CARNMT1Q8N4J0 409 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 GBP7Q8N8V2 638 aaPredicted RBP4.07□□□□□ -1.76
SMC4-218ENST00000486711 SLC37A3Q8NCC5 494 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 OR4C3Q8NH37 302 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 MGARPQ8TDB4 240 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 DYRK2Q92630 601 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 KRT35Q92764 455 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 TAF15Q92804 592 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMC4-218ENST00000486711 ZNF524Q96C55 264 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 AP2M1Q96CW1 435 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 CUEDC2Q9H467 287 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 AKIRIN1Q9H9L7 192 aaPredicted RBP4.07□□□□□ -1.76
SMC4-218ENST00000486711 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
SMC4-218ENST00000486711 SLC52A3Q9NQ40 469 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 AGTPBP1Q9UPW5 1226 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 NSG2Q9Y328 171 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 HBS1LQ9Y450 684 aaKnown RBP4.07□□□□□ -1.76
SMC4-218ENST00000486711 KLK4Q9Y5K2 254 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 COLEC10Q9Y6Z7 277 aa4.07□□□□□ -1.76
SMC4-218ENST00000486711 GREB1LQ9C091 1923 aaPredicted RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 TRBV5-5A0A0J9YX44 114 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms